Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01982 ATGATGGCATTGGAATGTAGTTTCCACTTCCTAAATGGGGTTTACATGGCGCTGTTGTTTTGCCTTGGCATTGTCCTTGTGAATTCGGTTAATGAAGAGGGGGCGAGTCTTTTGAGGTTCAAAGCTTCCCTTCTTGACCTTAACAACAATCTCTATAACTGGAATTCTTCTGATTTGACTCCTTGCAATTGGACTGGTGTGTATTGCACGGGTTCAGTGGTAACTTCTGTGAAACTTTATCAACTCAATCTGTCTGGTACTTTGGTTCCTGCCATCTGTAATCTTCCAAACCTGCTTGAGTTGAACCTGTCAAAAAATTTCATGACTGGCCCCATTCCTGATGGTTTTGACTGTGATGGTTTGGAGGCTTTGGACCTTTGCACAAATAGGCTTCATGGACCCCTTCTGACCCCTATTTTGAAAATCACAACACTTAAAAAGCTTTATTTATGTGAAAACTATATGTATGGTGAAGTGCCAGAGGAGCTTGGGAATTTGGTGTCACTTGAGGAGCTAGTCATTTATAGCAATAATTTAACTGGAAGGATCCCCTCGTCAATAGGAAGATTGAAGCAGCTTAGAGTTATAAGGGCAGGTCTGAATACCTTCTCAGGGCCAATACCTGCTGAAATTAGTGACTGTGAGAGCTTGGAGATATTGGGTTTGTCACAGAATCAACTAGAAGGTTCCATTCCAAGGGAGCTTCAAAAGCTTCAAAACCTCACCAATATACTTTTATGGCAGAACTCATTCTCTGGGGAGATTCCTCCTGAGATTGGAAACATTAGTAGCTTGGAACTGCTTGCTTTGCACCAAAATTCACTAAGTGGTGATATCCCCAGGGAACTGGGAAAGCTGTCCCAGTTGAAGAAGTTGTACATGTACACCAATATGTTGAATGGAACAATTCCACCAGAGCTAGGAAACTGCACAAATGCCATTGAGATAGACCTTTCGGAGAACCGTTTGATTGGAACCATTCCCAAGGAGTTGGGCAGGATCTCTAATCTTAGCTTGCTTCATCTGTTTGAAAACAATCTACAGGGTCATATTCCGAGGGAGCTTGGTCAGTTGAGGGCGCTAAGAAATTTAGACTTGTCATTGAATAACTTGACAGGTACAATTCCACTGGAGTTTCAAAACCTCACATTCATGAAGGATTTGCAGCTGTTTGACAATCAACTTGAGGGTGTAATTCCTCCTCATCTTGGAGCCATTAGAAACCTTACTATTCTGGATATATCTGCAAATAACCTTGTTGGTATGATACCTGTCAATCTATGTCAATATCAGAAGCTGCAATTCCTGAGCCTTGGGTCAAATAGGTTGTATGGAAATATTCCTTATAGCCTCAAAACATGCAAATCACTTGTGCAGCTTATGCTGGGGGACAACCAGTTGACAGGAAGCCTTCCTGTTGAATTATATGAACTTCACAATCTCACTGCACTTGAACTCTATCAGAATCGATTTTCAGGGATAATAAACCCCGGCATAGGCCAGCTCAGGAATCTAGAGAGACTTCTTTTGTCAGCTAACTACTTTGAAGGCTATCTTCCTCCTGAGATTGGAAATTTGGCACAACTTGTGACATTTAATGTTTCCTCTAACCGTTTCAGTGGAAGTATTCCTCATGAGTTGGGAAACTGTGATAGACTGCAGAGGCTTGATCTTAGCAGGAACCACTTCACTGGCATGCTTCCAAATGAAATTGGCAATTTGGTGAACTTGGAGCTGTTGAAAGTTTCAGATAACATGCTCTCAGGAGAAATACCTGGAAGTTTGGGGAACCTTATTAGGCTCACGGACCTGGAACTAGGAGGCAACCGGTTTTCAGGAAGCATTTCTTTTCACTTGGGAAGACTTGCAGCTCTTCAGATTGCACTTAACTTGAGCCATAACAAACTTTCTGGCTCAATTCCTGATAGCCTTGGGAACTTACAAATGCTAGAGTCCCTTTATCTAAATGACAATGAACTTGTTGGTGATATTCCTTCATCAATTGGTAATCTCCTCAGTCTTGTAATATGCAATGTATCTAACAACAAGCTGGTAGGAACTGTTCCAGACACCACTACATTTAGAAAGATGGATTTCACAAACTTTGCAGGGAACAACGGCTTGTGCCGTATTGGTACTAATCATTGCCATCCATCTGTATCTCCCTCTCATAGTACAAAACAAAGCTGGATCAGAAATGGTTCATCAAGGGAAAAGATAGTGAGCATTGTTTCTGGGGTGGTTGGACTAGTTTCTCTTATTTTCATAGTGTGCATATGTTTGGCCATGAGGCGCCGTAGCCATGCTGCATTTGTTTCACTTGAAGGGCAAACAAAGACTCATGTCTTGGATAACTACTACTTTCCTAAAGAAGGCTTTACATATCAGGATCTCTTGGAAGCCACTGGCAATTTTGCAGAAGCTGCAGTTCTAGGAAGAGGAGCCTGTGGAACTGTTTACAAGGCTGTTATGAGTGATGGTGAAGTGATTGCTGTTAAGAAGCTGAATTCACGCGGAGAAGGAGCAAATAATGTTGACAGAAGCTTCCTTGCTGAGATTTCAACTCTCGGAAAAATCAGGCACAGGAATATTGTGAAGCTGTATGGATTTTGCTACCATGAGGATTCTAATCTTCTCTTATATGAGTACATGGAAAATGGAAGCCTCGGGGAACAACTGCATTCAAGTGCAACCACTTGTGCATTGGATTGGGGTAGTCGGTATAATATTGCTCTTGGAGCAGCAGAAGGCTTATGCTATCTTCATTATGATTGTAAGCCTCAAATCATCCACCGAGATATAAAGTCAAACAACATATTACTTGATGAGGTGTTTCAGGCTCACGTTGGAGACTTTGGCTTGGCAAAGTTGATTGATTTTTCCTACTCAAAATCCATGTCAGCTGTGGCAGGTTCATATGGCTACATTGCCCCAGAATATGCTTACACCATGAAGGTGACTGAGAAGTGTGACATCTATAGCTTTGGGGTAGTTTTGCTGGAACTAGTTACTGGGAGGTCACCTGTTCAACCTTTGGAACAAGGTGGTGATTTAGTGACTTGTGTTAGAAGAGCAATCCAAGCATCAGTACCAACATCTGAACTATTTGACAAGAGATTGAATCTTACTGCACCAAAAACAGTTGAAGAAATGTCTCTTATTCTCAAAATTGCCCTGTTCTGCACTAGCACATCTCCACTTAATAGGCCTACAATGAGAGAGGTCATTGCAATGTTAATTGATGCTAGGGAATATGTCAGCAACTCACCAACCTCTCCTACATCAGAATCTCCATTGGATGGGGATGATATAATTTCTTCCAAAGACGGCGGTGGTCTTGAGTTGTAAGTTATAAGGCTAACTTCGTCCTCTATAGAGAAAGTTTTT 3387 0.4175 MMALECSFHFLNGVYMALLFCLGIVLVNSVNEEGASLLRFKASLLDLNNNLYNWNSSDLTPCNWTGVYCTGSVVTSVKLYQLNLSGTLVPAICNLPNLLELNLSKNFMTGPIPDGFDCDGLEALDLCTNRLHGPLLTPILKITTLKKLYLCENYMYGEVPEELGNLVSLEELVIYSNNLTGRIPSSIGRLKQLRVIRAGLNTFSGPIPAEISDCESLEILGLSQNQLEGSIPRELQKLQNLTNILLWQNSFSGEIPPEIGNISSLELLALHQNSLSGDIPRELGKLSQLKKLYMYTNMLNGTIPPELGNCTNAIEIDLSENRLIGTIPKELGRISNLSLLHLFENNLQGHIPRELGQLRALRNLDLSLNNLTGTIPLEFQNLTFMKDLQLFDNQLEGVIPPHLGAIRNLTILDISANNLVGMIPVNLCQYQKLQFLSLGSNRLYGNIPYSLKTCKSLVQLMLGDNQLTGSLPVELYELHNLTALELYQNRFSGIINPGIGQLRNLERLLLSANYFEGYLPPEIGNLAQLVTFNVSSNRFSGSIPHELGNCDRLQRLDLSRNHFTGMLPNEIGNLVNLELLKVSDNMLSGEIPGSLGNLIRLTDLELGGNRFSGSISFHLGRLAALQIALNLSHNKLSGSIPDSLGNLQMLESLYLNDNELVGDIPSSIGNLLSLVICNVSNNKLVGTVPDTTTFRKMDFTNFAGNNGLCRIGTNHCHPSVSPSHSTKQSWIRNGSSREKIVSIVSGVVGLVSLIFIVCICLAMRRRSHAAFVSLEGQTKTHVLDNYYFPKEGFTYQDLLEATGNFAEAAVLGRGACGTVYKAVMSDGEVIAVKKLNSRGEGANNVDRSFLAEISTLGKIRHRNIVKLYGFCYHEDSNLLLYEYMENGSLGEQLHSSATTCALDWGSRYNIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDEVFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTCVRRAIQASVPTSELFDKRLNLTAPKTVEEMSLILKIALFCTSTSPLNRPTMREVIAMLIDAREYVSNSPTSPTSESPLDGDDIISSKDGGGLEL 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01982 1115 SUPERFAMILY RNI-like 363 686 - -
Pste3g01982 1115 MobiDBLite consensus disorder prediction 1087 1101 - -
Pste3g01982 1115 SMART serkin_6 805 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01982 1115 Gene3D Ribonuclease Inhibitor 181 282 IPR032675 -
Pste3g01982 1115 FunFam Nuclear pore complex protein NUP107 30 181 - -
Pste3g01982 1115 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 770 883 - -
Pste3g01982 1115 Gene3D Phosphorylase Kinase; domain 1 768 883 - -
Pste3g01982 1115 Gene3D Transferase(Phosphotransferase) domain 1 884 1096 - -
Pste3g01982 1115 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 280 382 - -
Pste3g01982 1115 Gene3D Ribonuclease Inhibitor 287 381 IPR032675 -
Pste3g01982 1115 Gene3D Ribonuclease Inhibitor 382 721 IPR032675 -
Pste3g01982 1115 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 484 1080 - -
Pste3g01982 1115 MobiDBLite consensus disorder prediction 1087 1115 - -
Pste3g01982 1115 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 413 720 - -
Pste3g01982 1115 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Pste3g01982 1115 ProSiteProfiles Protein kinase domain profile. 805 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01982 1115 SUPERFAMILY L domain-like 46 396 - -
Pste3g01982 1115 Gene3D Ribonuclease Inhibitor 31 180 IPR032675 -
Pste3g01982 1115 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 182 279 - -
Pste3g01982 1115 SUPERFAMILY Protein kinase-like (PK-like) 782 1079 IPR011009 -
Pste3g01982 1115 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 884 1096 - -
Pste3g01982 1115 Pfam Protein kinase domain 807 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01982 1115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 929 941 IPR008271 GO:0004672|GO:0006468
Pste3g01982 1115 SMART LRR_typ_2 286 310 IPR003591 -
Pste3g01982 1115 SMART LRR_typ_2 478 502 IPR003591 -
Pste3g01982 1115 SMART LRR_typ_2 358 381 IPR003591 -
Pste3g01982 1115 SMART LRR_typ_2 166 190 IPR003591 -
Pste3g01982 1115 SMART LRR_typ_2 526 550 IPR003591 -
Pste3g01982 1115 SMART LRR_typ_2 574 598 IPR003591 -
Pste3g01982 1115 SMART LRR_typ_2 95 118 IPR003591 -
Pste3g01982 1115 SMART LRR_typ_2 647 671 IPR003591 -
Pste3g01982 1115 SMART LRR_typ_2 406 430 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01982 Pste-Chr3 13521637 13525721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01982 52 1084 Receptor kinase-like Gene Family AT1G73080 37.998 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste3g01982 Pkinase 9.4e-47 CL0016