Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01960 CGGATGTACTGTTTATCTTTCCAGAGATCCTACAATCAACTTAGATTCGATAATAAAAAACCACAGTCATATACGTGCTGAATACATGATTACCAACTTGCACAATTGGTGTGAAAACTTCACCAAAATAAACATAATTAATAGTGTGAAAATGGAGCAATTTGATAGTGTGAAAAGAGGAGCGTGTTGGTTAATTAGGTGTGCCATTAAACAGCGAGTAGTTGAAGCAGCCTTAGTCTTGGTCTTGTACGAAAATGAAAGACAGAAGATTCAAAACGAGTAGGCGTCGGTTCATGGCTTCATGATCATAGTCATTCATGGACCCTCACTTCATTCATGATAAAACCAACACAGCCACACAACTCAACCCCATCATCACGCCTTCTCACTCTACCCCCTTAACTTCTTCAAACTACAAACTGTACCTCTGATTATTTTTTTCTTTAGTTGTTTCCTACACCGTCTGAGGTAACCTTGAAGTGAGTTCATTAGAAGCATTTGATACCATTTTGACGTTTGAAGCCACTTGTAGTATTGTACTTCGTTCAGTCATGACTTGTTTTTCTTTATTATTCAGTAAGTTGTCTTCTTCAGCAAGACTCGATCCGGAAATATATGAAGGAATTCATAATGTTAAAATATATACCTACAAAGAACTAAGAAATGCAACTGAGGATTTTAGTCCAGTCAATAAAATTGGAGAGGGTGGTTTTGGTTCTGTCTACAAGGGACGGCTTAAAGATGGAAAAGTTGCTGCAATAAAAGTTCTTTCAGCTGAATCAAGACAAGGGGTGAAGGAATTCTTAACAGAGATTAATGTGATCTCAGAGATACAACATGAAAATTTGGTCAAGTTATATGGTTGTTGTGTGGAAAAGGATAACAGAATTTTAGTCTACAATTACCTTGAGAACAACAGCCTATCACAAACTCTTCTAGGTGGACGTCATCACAATAATATTTACTTCGATTGGCGACACGATGTAGAATATGCATTAGGGTTGCACGTGGGCTTGCCTTTCTTCATGAAGAAGGATATAAAAGCAAGCAATATCCTCCTTGACAAAGATCTTACACCCAAGATTTCAGATTTTGGTCTTGCAAAGCTTATTCCAGCAAACATGACTCATGTCAGTACTCGTGTGGCGGGAACAATAGGTTATTTGGCACCAGAGTATGCAATAGGAGGTAAGCTAACAAGGAAAGCAGACATTTACAGCTTTGGTGTCCTCCTGGTGGAGATAATCAGTGGAAGATGTAACACAAGCTCACGACTACCAGTAGAAGAACAATTTCTTCTAGAGAGGACATGGGAACTTTATGAGCGAAAGGAATTGGTTGGACTGGTAGATGTATCACTAAACGGTGAATTCGATGCTGAGCAGGCCAGTAAGTTTCTGAAGATTGGCCTTCTTTGTACTCAAGAATCGCCAAAGCTCCGGCCATCCATGTCTTCTGTGGTTAAGATGCTCACTGGAAAAATGGATGTTGATGACAGTAAGATAACAAAACCTGCCTTAATTTCTGATTTTATGGATCTCAAAGTCAGACGGAGTGGAGAAACTACTAGTACGGATATGAAGAATTCATCTTTGTACAATACAACCTCTACTTTAGACAACCATGATACTACCATGTCATCTGCCACAGCTACAAGCTTCGCCAACTTTGCTGTAAGATATGATGAAAGCTTCTAAACATCAATCGACAGTGATTTCTCCTTCAATAGAAAAATTATTTGATTTTCTTAGGCTTGTTTCGCATGTAAATTTTGCAACCTTTTTGATACTGAGTGTTTTTTTTTTCTTGGATGTAGTCCTCCATCACTAGAAAGTTACTACGTGCTGTTCTGTAAATATAAACTGGGCTTGTGTTCAAGGATAAATTTAAAGATCTTTCATATCCTTTGTATTCTGCTTCTT 1922 0.3809 MTCFSLLFSKLSSSARLDPEIYEGIHNVKIYTYKELRNATEDFSPVNKIGEGGFGSVYKGRLKDGKVAAIKVLSAESRQGVKEFLTEINVISEIQHENLVKLYGCCVEKDNRILVYNYLENNSLSQTLLGGRHHNNIYFDWRHDVEYALGLHVGLPFFMKKDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIGGKLTRKADIYSFGVLLVEIISGRCNTSSRLPVEEQFLLERTWELYERKELVGLVDVSLNGEFDAEQASKFLKIGLLCTQESPKLRPSMSSVVKMLTGKMDVDDSKITKPALISDFMDLKVRRSGETTSTDMKNSSLYNTTSTLDNHDTTMSSATATSFANFAVRYDESF 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01960 381 Gene3D Phosphorylase Kinase; domain 1 15 118 - -
Pste3g01960 381 ProSiteProfiles Protein kinase domain profile. 43 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01960 381 Pfam Protein kinase domain 46 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01960 381 SMART serkin_6 43 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01960 381 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Pste3g01960 381 Gene3D Transferase(Phosphotransferase) domain 1 119 323 - -
Pste3g01960 381 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 27 344 - -
Pste3g01960 381 FunFam cold-responsive protein kinase 1 15 118 - -
Pste3g01960 381 FunFam Lectin-domain containing receptor kinase A4.3 119 325 - -
Pste3g01960 381 SUPERFAMILY Protein kinase-like (PK-like) 26 323 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01960 Pste-Chr3 13365178 13369868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01960 31 326 Receptor kinase-like Gene Family AT1G56120 50.987 1.23e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g01960 Pkinase 7.9e-40 CL0016