Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01928 CTACAAGCATGCGAAACAAGTAATGGAAGCAAGAGAGAAGAGGAGGATATTGAAAGAGACATGGTGTTCCTTGGCATCATAACGTTTTTTGACCCACCCAAGGACTCAGCAAAGCAAGCACTGTGGCGTTTGTCTGAGAAGGGAGTGAAAGCAAAGGTTTTAACTGGTGACTCCCTCTCCTTGGCAACAAAAGTATGCAGGGAAGTTGGAATAAGTACCACTCATGTAATGACAGGTCCTGAACTAGAGCAACTTGACCAAGACACTTTCCACGAAACAGTTAAAAGAGCCACAACAGTAGGAAACCATGTTGTTGGATTCTTAGGAGATGGAGTGAATGATTCACTGGCTTTAGATGCTGCAAATGTAAGCATTTCTGTGGACTCCGGTGTAGCCATTGCCAAAGACATGGCAGATATTATCTTACTTGAGAAAGATCTCAACGTGCTTGTTGCAGGAGTGGAGCATGGAAGACTCACTTTTGGCAATACAATGAAGTATGTTAAGATGTCAGTGATTGCTAACTTGGGAAGTGTCATTTCACTCCTCATAGCAACAATCTTATTCAAGTACGAGCCCTTGACTTCTAGGCAGCTTCTTACTCAGAATTTCATTTACAGTGTGGGACAAATTGCCATTGCTTGGGACAAGATGGATGAAGAGTATGTTAAGACACCTCATAAGTGCTCAGATAGAGGCTTGTCCATGTTCGTATTATGGAATGGACCAGTGTGCACCCTTTGTGATGTGACAACACTTTTATTTCTTTGGTTTTATTACAAGGCTTACACTGATATTACTCAGAAGTTTTTCCATTCAGCTTGGTTCATTGAAGGTCTCCTATTGCAGACCCTCATCATCCACTTGATTAGAACTGAGAAAATCCCTTTTATACAAGATGTTGCATCTTGGCCTTTGATTTTCTCCACTATTGCAACATCTGCAATTGGAATTGCACTTCCATTCACACCCATTGGGAAGATCATGGGATTCTCCCTTCTACCTCTCTCATATTTCGGCTTTTTGGTGGTTCTTTTTCTGGGGTATTTTACAATTGGCCAG 1062 0.4181 LQACETSNGSKREEEDIERDMVFLGIITFFDPPKDSAKQALWRLSEKGVKAKVLTGDSLSLATKVCREVGISTTHVMTGPELEQLDQDTFHETVKRATTVGNHVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYVKMSVIANLGSVISLLIATILFKYEPLTSRQLLTQNFIYSVGQIAIAWDKMDEEYVKTPHKCSDRGLSMFVLWNGPVCTLCDVTTLLFLWFYYKAYTDITQKFFHSAWFIEGLLLQTLIIHLIRTEKIPFIQDVASWPLIFSTIATSAIGIALPFTPIGKIMGFSLLPLSYFGFLVVLFLGYFTIGQ 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01928 354 SUPERFAMILY Calcium ATPase, transmembrane domain M 157 352 IPR023298 -
Pste3g01928 354 SUPERFAMILY HAD-like 17 156 IPR036412 -
Pste3g01928 354 Gene3D - 146 319 - -
Pste3g01928 354 PRINTS Magnesium-transporting ATPase signature 166 181 IPR006415 GO:0015444|GO:0015693|GO:0016020
Pste3g01928 354 PRINTS Magnesium-transporting ATPase signature 216 229 IPR006415 GO:0015444|GO:0015693|GO:0016020
Pste3g01928 354 PRINTS Magnesium-transporting ATPase signature 236 252 IPR006415 GO:0015444|GO:0015693|GO:0016020
Pste3g01928 354 PRINTS Magnesium-transporting ATPase signature 271 292 IPR006415 GO:0015444|GO:0015693|GO:0016020
Pste3g01928 354 PRINTS Magnesium-transporting ATPase signature 321 342 IPR006415 GO:0015444|GO:0015693|GO:0016020
Pste3g01928 354 Pfam haloacid dehalogenase-like hydrolase 22 122 - -
Pste3g01928 354 NCBIfam HAD-IC family P-type ATPase 21 187 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g01928 354 Gene3D - 11 30 IPR023299 GO:0000166
Pste3g01928 354 PANTHER CATION TRANSPORTING ATPASE 12 349 - -
Pste3g01928 354 Gene3D - 31 145 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01928 Pste-Chr3 13079123 13080238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01928 8 231 Primary Pumps ATPases(2) AT1G10130 28.112 6.75e-29 116