Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01912 AAGGCAGCACCAATCTCTTCGCCGCCTCTCTCTCTGTCGCTCTTTCAGATCGCTTTTTTTCTCTTATTCCTTTTTCTTGTTTCGATTTCCTTCAGATCTGTGTCTTACTCCGATTCTGTTTCGCTCTTTTTTATTATTTTAAGCAATCTCGCACCTTACACTGAGATGAACGTGAAGTTCACGGCTGAAGAGCTACGTCGTATCATGGACTATAAACATAATATCCGTAATATGTCTGTCATTGCCCATGTTGATCACGGAAAATCAACACTCACTGATTCCCTTGTAGCTGCTGCTGGCATTATTGCTCAAGAAGTGGCAGGTGATGTCCGTATGACAGATACCCGTGCAGATGAAGCTGAACGTGGTATCACAATCAAGTCTACGGGTATCTCACTCTATTATGAAATGACTGAGGAATCTCTCAAGAGTTACAAGGGAGAGCGTAATGGCAATGAGTATCTCATCAATCTCATTGACTCCCCTGGGCACGTGGACTTCTCATCTGAGGTTACTGCTGCACTTCGAATTACTGATGGAGCCCTGGTTGTGGTGGATTGTGTTGAAGGTGTCTGTGTACAGACTGAAACTGTGCTACGGCAAGCCCTGGGAGAAAGGATTAGGCCTGTTCTGACTGTTAACAAGATGGACAGGTGCTTCCTTGAACTCCAGGTTGATGGAGAGGAGGCTTATCAGACCTTTCAAAGGGTTATTGAGAATGCTAATGTGATCATGGCTACATACGAGGATCCGCTACTTGGTGATGTTCAGGTGTATCCAGAGAAAGGAACAGTTGCTTTTTCTGCTGGTTTGCACGGTTGGGCTTTTACCTTGACTAACTTTGCCAAGATGTATGCATCTAAATTTGGAGTTGATGAAGGAAAGATGATGGAGAGGCTCTGGGGTGAAAACTTCTTTGATCCAGCCACAAAGAAATGGACCAGCAAGAATACTGGTTCTGCTACCTGTAAGCGTGGGTTTGTTCAGTTCTGTTATGAGCCCATCAAGCAGATAATTAACACTTGTATGAATGATCAGAAGGATAAGCTGTGGCCTATGCTGCAAAAGCTTGGGGTCACCATGAAATCTGATGAGAAGGACCTCATGGGTAAAGCATTGATGAAGCGTGTCATGCAAACCTGGCTTCCAGCTAGTAGTGCACTATTGGAAATGATGATATTTCATCTTCCATCTCCATCAACAGCTCAGAAATATCGTGTGGAGAATTTGTATGAGGGTCCCCTTGATGATCAATATGCTGCTGCTATCAGGGCCTGTGATCCTGAAGGTCCTCTGATGCTCTATGTCTCAAAGATGATTCCAGCATCTGATAAAGGTAGGTTTTTTGCTTTTGGTCGTGTGTTCTCAGGCAAGGTTTCAACTGGTTTGAAGGTCAGAATCATGGGACCCAACTATGTCCCTGGGGAGAAAAAGGATTTGTATGTTAAAAGTGTTCAGCGAACTGTCATTTGGATGGGAAAGAAGCAGGAAACTGTTGAGGATGTGCCTTGTGGTAATACAGTTGCTCTGGTTGGTCTTGATCAATTTATCACAAAGAATGCTACCTTGACAAATGAGAAGGAAGTTGATGCCCACCCTATCCGAGCTATGAAGTTTTCTGTCTCTCCTGTTGTTCGTGTTGCTGTTCAGTGCAAGGTTGCCTCAGATCTTCCCAAGCTTGTTGAAGGCCTTAAGAGGTTGGCAAAATCAGATCCTATGGTTGTTTGTACTATTGAGGAGTCTGGGGAACACATTGTTGCTGGTGCGGGAGAGCTTCATCTTGAGATCTGTTTGAAGGATTTGCAGGAAGATTTCATGGGTGGAGCTGAAATTATTAAGTCTGACCCAGTTGTGTCATTCAGAGAGACTGTTCTAGAGAGATCATGCCGCACTGTGATGAGCAAGTCACCAAACAAGCACAACCGTCTATACATGGAGGCAAGACCAATGGAGGATGGACTTGCTGAAGCCATTGATGATGGCAAGATTGGACCAAGGGATGACCCCAAGGTTCGTTCTAAGATCTTGTCAGAAGAGTATGGTTGGGACAAGGATCTTGCCAAGAAGATCTGGTGTTTTGGCCCTGAGACAACTGGACCCAACATGGTGGTTGATATGTGTAAGGGAGTCCAGTATTTGAATGAAATCAAGGATTCTGTGGTTGCTGGTTTCCAGTGGGCATCAAAAGAAGGTGCATTGGCTGAAGAAAACATGAGAGCCATCTGCTTCGAAGTATGTGATGTTGTCCTGCACGCTGATGCTATCCACAGAGGAGGAGGTCAGATCATTCCTACTGCCAGGAGAGTATTCTATGCTTCCCAGCTGACTGCCAAACCCAGGCTTCTTGAACCGGTTTACCTTGTTGAAATTCAAGCGCCAGAGCAAGCACTTGGTGGTATTTACAGTGTTCTTAACCAGAAACGTGGACATGTGTTCGAGGAAATGCAGAGGCCAGGAACCCCACTCTACAACATCAAAGCCTACCTCCCAGTCATTGAGTCCTTTGGATTCTCAAGCACATTGAGGGCTGCAACATCAGGCCAGGCTTTCCCACAGTGTGTCTTTGATCACTGGGACATGATGTCCTCTGACCCATTGGAGGTTGGTTCACAGGCAGCACAGCTTGTTACTGACATTCGCAAAAGGAAGGGCTTGAAGGAACAGATGACTCCTCTCTCCGATTCACAGTTGATGAACTTCGGCGGATTATGGACTGCAAGCACAACATTAGGAACATGTCTGTTATTGCTCATGTTGATCATGGTAGGAAAATCCACGCTGACAGATTCTCTTGTGGCTGCTGCTGGTATCATAGCACAAGAGGTTGCAGGAGATGCGAGGATGACAGACACTCGTCAAGATGAAGCTGAGCGTGGTATCACTATCAAGTCTACTGGCATCTCTCTATACTATGAGATGTCCGAGGGTGATTTGAAGAATTTCAAGGGAGAGCATGAAGGCAATCAATTCCTTATAAATCTCATTGATTCACCAGGGCATGTAGACTTCTCATCTGAGGTTACAGCTGCGCTTCGCATCACTGATGGAGCACTTGTGGTGGTGGATTGTGTGGAGGGTGTCTGTGTCCAAACAGAAACAGTGATGAGACAAGCCATTACCTTGATGCAGAGGAGGCATGCCTTACATTTCAGAGGGTTGTTGAGAGTGCAAACAGAAGGGAACAGTTGCTTTTTCTGCTGGTTTGCATGGATGGGGGGTTTTACCATTACCAACTTCGCTAAGAAGTATGCTTCCAAGTTTGGAGTTGATGAGGCAAAAATGACAAGTAGGCTTTGGGGTGAGAATTTCTATGACTCTGCTACCAAAAAGTGGACCAACAAGCACACCAGCAGTTCTACTTGTAAGCGCGGCTTTGTTAAGTTCTGTTATGAACCAATCAAAGAGATTATTGAACTTTGCATGAATGACCAGAGGGATGAGTTGTGGTCCAAGTTGCAGAAGCTTGGGGTGAACTTGAAGTCAGATGAAAAGGAGTTGACAGGAAAGATTTTGATGAAGCGTGTTATGCAGAGCTGGCTACCAGCAAGTAGCGCCCTTCTGGAGATGATAATATTTCATCTTCGTTCTCCAGCGACATCCCAGAAGTATCGTGTGGAGAATTTGTATGAGGGTCCTCTTGATGATCAATATGCTGCTGCTATCAGAAACTGTGATCCTCAAGGTCCTCTGATGCTCTCTATATTTTTTGCTTTTGGCCATGTATTCTCAGGCAAGGTTTCAACTGGTTTGAAGGTCAGAATCATGGGACCCAACTATGTCCCAGGGGAGAAAAAGGACTTTTATGTTAAAAGTGTTCAGAGAACTGTACTTTGGATGGGAAAGAAACAGGAAACTGTTGAGGATGTGCCTTGTGGAAACACAGTAGCTATGGTGGGTTTGGACCAATTCATCACCAAGAATGCTACATTGACAAACGAGAAGGAAATTGATGCACACCCCATTCGAGCTATGACGTTTTCTGTGTCACCGGTGGTAAGTGTTGCTGTTACAAGCAGAGTTGCAGCAGATTTTCCTAGGCTTGTTGAAGGCCTAAAACGCTTAGCAAAGTCAGATCCTATGGTGGTCTGCACAATTGCCAAGACCGGAGAGCAAATAATATCTGCTGCTGGAGAGCTTCATCTTGAAATCTGCTTGAAAGACCTTCAGGATGATTTCATGAATGGTGCACAGATTTCAGTATCGGATCCTATTTTCTCCTTCGGCAAGACAATTTTTGAGAAATCTTGCCGCACAGTGATGAGCAAGTCACCTAACAAACACAACTGTCTCTATATGAAAGCAAGGCCAATGGAGGCTGGACTTGCAGAGGCCACTGAAGATGAAAATATTGGACCAAGGGTTGACCCCATACGTCGTTCTAATATTCTGTGCCAAGAGTATGGTTGGGACCAGGATCTGGCCAGAAAAATATGGTGTTTTGGACCTGAGGGTAAAGGACCCAAGGTGGTGGTAGATACTTGCAGGGGCATACACTACCTCAATGAAATCAAAGACTCGGTTGTTGCAGGCTTTGAGTGGGCATCAAGAGAAGGGCCAATGGCCAAGGAGAAAATACAAGGGGTATGCTTTAAGATTTGCGATGTTGTTCTTCATTCTGATGCCATTCATAGAGGAGGCTGCTATGCAGCCATGCTGACAGCAAAACCAAGACTTCTTGAGCCTGTATATCTGGTGGAGATTCAGGCTCCTGAACAGGCTCTTGACAGTGTTCTTAACCAGAAAAGAGGGCATGTGTTTGAGGAAATCCAGAGGCATGGCACCCCATTTTACAATGTCATGGCATATTTGCCTGTTATTGAGTCCTTTAGGTTCAATGAATCACTAAGGGCTCAAACAGTAGGACAGGTTTTCCCACAGCTAGTATTTGACCACTGGGATATGGTGCCATCTGATCCACTAGAACCTGGCAGTCCTGCTGCTGCTCGTGTTGCAGAGATAAGAAAGAGGAAAGGCTTGCATGTACAAATGATTCCTCTCTCGGAATTTGAGGACAGGCTT 5019 0.4521 KAAPISSPPLSLSLFQIAFFLLFLFLVSISFRSVSYSDSVSLFFIILSNLAPYTEMNVKFTAEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTEESLKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEGKMMERLWGENFFDPATKKWTSKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSDEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYAAAIRACDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVALVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEDGLAEAIDDGKIGPRDDPKVRSKILSEEYGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRAICFEVCDVVLHADAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEVGSQAAQLVTDIRKRKGLKEQMTPLSDSQLMNFGGLWTASTTLGTCLLLLMLIMVGKSTLTDSLVAAAGIIAQEVAGDARMTDTRQDEAERGITIKSTGISLYYEMSEGDLKNFKGEHEGNQFLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVMRQAITLMQRRHALHFRGLLRVQTEGNSCFFCWFAWMGGFTITNFAKKYASKFGVDEAKMTSRLWGENFYDSATKKWTNKHTSSSTCKRGFVKFCYEPIKEIIELCMNDQRDELWSKLQKLGVNLKSDEKELTGKILMKRVMQSWLPASSALLEMIIFHLRSPATSQKYRVENLYEGPLDDQYAAAIRNCDPQGPLMLSIFFAFGHVFSGKVSTGLKVRIMGPNYVPGEKKDFYVKSVQRTVLWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEIDAHPIRAMTFSVSPVVSVAVTSRVAADFPRLVEGLKRLAKSDPMVVCTIAKTGEQIISAAGELHLEICLKDLQDDFMNGAQISVSDPIFSFGKTIFEKSCRTVMSKSPNKHNCLYMKARPMEAGLAEATEDENIGPRVDPIRRSNILCQEYGWDQDLARKIWCFGPEGKGPKVVVDTCRGIHYLNEIKDSVVAGFEWASREGPMAKEKIQGVCFKICDVVLHSDAIHRGGCYAAMLTAKPRLLEPVYLVEIQAPEQALDSVLNQKRGHVFEEIQRHGTPFYNVMAYLPVIESFRFNESLRAQTVGQVFPQLVFDHWDMVPSDPLEPGSPAAARVAEIRKRKGLHVQMIPLSEFEDRL 1673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01912 1673 SUPERFAMILY Ribosomal protein S5 domain 2-like 618 782 IPR020568 -
Pste3g01912 1673 SUPERFAMILY EF-G C-terminal domain-like 783 890 IPR035647 -
Pste3g01912 1673 Gene3D Yeast translation eEF2 (G' domain) 1076 1180 - -
Pste3g01912 1673 SUPERFAMILY EF-G C-terminal domain-like 1327 1403 IPR035647 -
Pste3g01912 1673 Pfam Elongation factor G C-terminus 1557 1640 IPR000640 -
Pste3g01912 1673 Pfam Elongation factor G C-terminus 780 867 IPR000640 -
Pste3g01912 1673 FunFam Translation elongation factor 2 1329 1406 - -
Pste3g01912 1673 FunFam Translation elongation factor 2 625 778 - -
Pste3g01912 1673 CDD eEF2_snRNP_like_C 1560 1636 - -
Pste3g01912 1673 CDD aeEF2_snRNP_like_IV 615 787 - -
Pste3g01912 1673 Pfam Elongation factor G, domain IV 1459 1546 IPR005517 GO:0005525
Pste3g01912 1673 Pfam Elongation factor G, domain IV 666 778 IPR005517 GO:0005525
Pste3g01912 1673 Pfam Elongation Factor G, domain III 543 605 IPR041095 -
Pste3g01912 1673 Pfam Elongation Factor G, domain III 1330 1392 IPR041095 -
Pste3g01912 1673 FunFam Elongation factor 2 1076 1180 - -
Pste3g01912 1673 FunFam Translation elongation factor 2 399 540 - -
Pste3g01912 1673 NCBIfam small GTP-binding protein domain 76 231 IPR005225 GO:0005525
Pste3g01912 1673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 922 1194 IPR027417 -
Pste3g01912 1673 SUPERFAMILY EF-G C-terminal domain-like 540 616 IPR035647 -
Pste3g01912 1673 FunFam Translation elongation factor 2 59 293 - -
Pste3g01912 1673 CDD aeEF2_snRNP_like_IV 1402 1564 - -
Pste3g01912 1673 FunFam Elongation factor 2 278 382 - -
Pste3g01912 1673 FunFam Translation elongation factor 2 1556 1673 - -
Pste3g01912 1673 Gene3D - 776 885 - -
Pste3g01912 1673 PRINTS GTP-binding elongation factor signature 77 90 IPR000795 GO:0003924|GO:0005525
Pste3g01912 1673 PRINTS GTP-binding elongation factor signature 209 218 IPR000795 GO:0003924|GO:0005525
Pste3g01912 1673 PRINTS GTP-binding elongation factor signature 173 184 IPR000795 GO:0003924|GO:0005525
Pste3g01912 1673 PRINTS GTP-binding elongation factor signature 121 129 IPR000795 GO:0003924|GO:0005525
Pste3g01912 1673 PRINTS GTP-binding elongation factor signature 157 167 IPR000795 GO:0003924|GO:0005525
Pste3g01912 1673 Coils Coil 1666 1673 - -
Pste3g01912 1673 CDD EF2_II 1235 1313 - -
Pste3g01912 1673 SMART EFG_IV_2 661 778 IPR005517 GO:0005525
Pste3g01912 1673 SMART EFG_IV_2 1449 1555 IPR005517 GO:0005525
Pste3g01912 1673 Gene3D Translation factors 1197 1327 - -
Pste3g01912 1673 Gene3D Translation factors 399 540 - -
Pste3g01912 1673 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1073 1671 - -
Pste3g01912 1673 CDD EF2 76 286 - -
Pste3g01912 1673 Pfam Elongation factor Tu domain 2 450 523 IPR004161 GO:0005525
Pste3g01912 1673 Pfam Elongation factor Tu domain 2 1237 1310 IPR004161 GO:0005525
Pste3g01912 1673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 397 IPR027417 -
Pste3g01912 1673 FunFam Translation elongation factor 2 542 619 - -
Pste3g01912 1673 Gene3D - 1412 1555 IPR014721 -
Pste3g01912 1673 Gene3D - 626 775 IPR014721 -
Pste3g01912 1673 SUPERFAMILY EF-G C-terminal domain-like 1560 1666 IPR035647 -
Pste3g01912 1673 FunFam Translation elongation factor 2 1197 1327 - -
Pste3g01912 1673 CDD EF2_II 431 526 - -
Pste3g01912 1673 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 73 400 IPR000795 GO:0003924|GO:0005525
Pste3g01912 1673 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 114 129 IPR031157 -
Pste3g01912 1673 Gene3D - 59 293 IPR027417 -
Pste3g01912 1673 Gene3D - 920 1048 IPR027417 -
Pste3g01912 1673 SUPERFAMILY Translation proteins 1196 1319 IPR009000 -
Pste3g01912 1673 Gene3D Elongation Factor G (Translational Gtpase), domain 3 542 619 - -
Pste3g01912 1673 Gene3D Elongation Factor G (Translational Gtpase), domain 3 1329 1405 - -
Pste3g01912 1673 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 950 965 IPR031157 -
Pste3g01912 1673 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 909 1041 IPR000795 GO:0003924|GO:0005525
Pste3g01912 1673 CDD eEF2_snRNP_like_C 783 861 - -
Pste3g01912 1673 Gene3D - 1556 1673 - -
Pste3g01912 1673 SUPERFAMILY Ribosomal protein S5 domain 2-like 1406 1559 IPR020568 -
Pste3g01912 1673 Pfam Elongation factor Tu GTP binding domain 923 1041 IPR000795 GO:0003924|GO:0005525
Pste3g01912 1673 Pfam Elongation factor Tu GTP binding domain 73 398 IPR000795 GO:0003924|GO:0005525
Pste3g01912 1673 CDD EF2_snRNP_III 543 615 - -
Pste3g01912 1673 SMART EFG_C_a 780 869 IPR000640 -
Pste3g01912 1673 SMART EFG_C_a 1557 1643 IPR000640 -
Pste3g01912 1673 SUPERFAMILY Translation proteins 398 532 IPR009000 -
Pste3g01912 1673 FunFam Translation elongation factor 2 779 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01912 Pste-Chr3 12932191 12942229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01912 58 894 Eukaryotic Initiation Factors Gene Family AT1G56070 92.712 0.0 1638