Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01902 AAGTCCTGTGTCTGAAGGCATAGTGACAGTCCAATTGTAATTTGCAACAAGCGCATCCAAACCCAGAAACCAATCATCTTTTATTGCGAACTTTTGCGCATTGGAATTTGGAGGCCATAAAAAAGATGCGATGCTACACGCAAACAAGTCCAATAAGAAAAGCAAGATAGGAGGATTGGCCAAGTTTCTGGCTTGCTCAATTGAAACAACATCCTCTTGCTCATAGTAATATAGAGTTCAAACCATGGAAGAACGGTATGAGATAATTAAAGATATTGGCTCAGGGAATTTTGGTGTGGCAAAGCTGGTAAAGGAAAAATGGAGTGGTCAATTATATGCTATCAAGTTCATTGAGAGAGGCTTTAAGATTGATGAGCACGTGCAAAGAGAGATTATAAATCATAGGTCATTGAAGCATCCCAATATCATTAGATTTAAAGAGGTGTTACTTACTCCAACTCATCTTGCAATAGTCATGGAATATGCTGCCGGGGGAGAATTGTTTGAAAGAATATGCAGTGCTGGGAGATTCAGTGAGGACGAGGCGAGATATTTCTTTCAGCAATTGATCTCTGGAGTCAGCTATTGCCATTCAATGGAAATTTGCCATAGAGATCTTAAGCTGGAAAACACACTTCTAGATGGAAGCTCAGCACCTCGACTTAAAATATGTGACTTCGGTTACTCAAAGGCAATAACTCATCACTTAGTTTCATTTAACACGAATGCTTTTAATTACTCAACAGTGTTCCTATGTTTTTTTCAGTCATCTGTTTTGCACTCCCAGCCAAAATCTACTGTAGGAACCCCTGCCTATATTGCACCAGAGGTTTTGTCAAGAAGAGAATATGATGGCAAGGTCGCGGATGTTTGGTCTTGTGGGGTGACCTTATATGTGATGTTGGTTGGTGCATATCCTTTTGAAGACCCAGAAGACCCAAGAAACTTCAGAAAAACACTTCAGCGAATTCTTAGTGTCCACTATTCTATTCCAGACTACGTACGCATCAGCAAAGAGTGTAGACATCTTTTGTCCCGAATATTTGTGGCCAATCCGGAAAAGAGAATTAGCATACCGGAAATTAAAATGCACCCTTGGTTCCAAAAGAACTTGCCCCTAGAATTTATGGACGAAGGGGAAGGGGTATTGCAAAATGACGTGAATGAGTCATCAGAGTATCAGACCATTGAAGAAATATTGTCCATAATTCAAGAGGGTAGGAAACCGGGTGAGGGCCCAAAAGTTGGTGAGCAATTTGTTGGGGGCAGCATGGACCTTGATGATATTGATGCAGATGCTGACATCGATGACATTGAGACAAGCGGTGACTTTGTCTGTGCCTTGTGAAATGTGAATGGAAGTTATGATGCTTGCAATCTTCCACTTTTCACTCCACTTCTCCCTGAAAAGCAGTTCAAGATAAGATGTTACTTAACCAGATAGAGAGGGAATCATACAAAACCTCTCTACCATTCCTTTCCTTGGAAGTTACCTTGTCTTCATCTCTGCCTAGCTATGTCGGAATAAGGGAATGTTGCTAATTTCCTGCTTTAGTTGTGCTTTTGCACTTAGCCAAAATATAATCAGACATGATCTCGTGTAACAATAATTATTAATTCGTAATTACTACTAATATAGTTGGGGTTTCTTTC 1653 0.4023 MEERYEIIKDIGSGNFGVAKLVKEKWSGQLYAIKFIERGFKIDEHVQREIINHRSLKHPNIIRFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPRLKICDFGYSKAITHHLVSFNTNAFNYSTVFLCFFQSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPDYVRISKECRHLLSRIFVANPEKRISIPEIKMHPWFQKNLPLEFMDEGEGVLQNDVNESSEYQTIEEILSIIQEGRKPGEGPKVGEQFVGGSMDLDDIDADADIDDIETSGDFVCAL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01902 367 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Pste3g01902 367 ProSiteProfiles Protein kinase domain profile. 5 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01902 367 SMART serkin_6 5 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01902 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Pste3g01902 367 Gene3D Transferase(Phosphotransferase) domain 1 81 293 - -
Pste3g01902 367 PANTHER SERINE/THREONINE KINASE 3 297 - -
Pste3g01902 367 SUPERFAMILY Protein kinase-like (PK-like) 3 293 IPR011009 -
Pste3g01902 367 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Pste3g01902 367 CDD STKc_SnRK2 4 285 - -
Pste3g01902 367 Pfam Protein kinase domain 5 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01902 Pste-Chr3 12831295 12834345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01902 4 304 CBL-interacting serine-threonine protein kinases AT5G25110 41.234 1.59e-66 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pste3g01902 Pkinase 3.2e-68 CL0016