Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01895 ATGAAAGAAAGTGGAAGAAAACAAGGTACAATGTCGCCATGTGCAGCTTGCAAGCTTCTTCGAAGGAGATGCACACGAGATTGTGTGTTTGCTCCTTATTTTCCTGCTGATGAACCCAGAAATTTGGAATTACCGGAACACCAAAGAAGTGATGCAGTTAGTTCAATGGTATATGAAGCAAATGCAAGGGTGAGGGACCCTGTGTATGGTTGTGTGGGAGCAATATCCTCTCTACAGCAGCAAGTTGATGTGCTCCAAACCCAATTGGCACTGGCACAAGCAGAGGTTGTGCACATGAGAATGCGCAAATTCACAACACCATCATCAGATCAACATAATCATCATCAACAACAACAACACTCGGTGCCTCCTGAACCTCCAATTCATCATCAGAAAACCTTTACCATTCAAGCAGGCTCTTGTCTTCACAAACCAAGTCCCTTTTGGCATGGACATGGTTGTGGATCAAGCCAACATGGGGCAATCTTTGTGGTCATACTAGCTTAGTTTATGGCTGGCATGCATGCATGCATGCATGTCTCACTTTATTTATTTTTCTTATCATTACTATTACTACCACGGGCTTGCTTTATTGTCTGCCTCATCAGTACCCTTTTTTGTGCTGCTTTTGTATCCCTCATCACTAGCTTGTTCCTCATGACTGAAAAGACATCATCTATCTCTCTGCATTACCAAGAGATGATGATGATGATTAGTTAGCATTAGTGTGTAAATGTCTAAACTTGTAATTATGAGTAATCATATCATTTGTATTAAGTTGACTACACTTTTTACC 796 0.4121 MKESGRKQGTMSPCAACKLLRRRCTRDCVFAPYFPADEPRNLELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMRMRKFTTPSSDQHNHHQQQQHSVPPEPPIHHQKTFTIQAGSCLHKPSPFWHGHGCGSSQHGAIFVVILA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01895 168 Coils Coil 75 95 - -
Pste3g01895 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 43 130 - -
Pste3g01895 168 MobiDBLite consensus disorder prediction 106 130 - -
Pste3g01895 168 Pfam Lateral organ boundaries (LOB) domain 43 93 IPR004883 -
Pste3g01895 168 Pfam Lateral organ boundaries (LOB) domain 13 41 IPR004883 -
Pste3g01895 168 MobiDBLite consensus disorder prediction 106 124 - -
Pste3g01895 168 ProSiteProfiles LOB domain profile. 12 96 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01895 Pste-Chr3 12741312 12745995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01895 1 106 AS2 family AT1G31320 71.545 4.92e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste3g01895 LOB 2.4e-15 No_clan