Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01879 GCATAGAAGAGGGATGGGGATTAGAGAAGAAGTCGTTAAGGAGGTGTGGAAAGAGATAGAGAAGAGGAGGGATGATGGTTGGGAAAAGTCTATGATAGTCCTACACGGCTACACTAAACTCAAAAAAGGTCCATATCTTACATCTAGAATGAGTCGAAGTGTCGGTGATTCACTTATTGCTGGCAATGGGACATCTCGGTGGCTTTCTCCCTCACGTGATTTTGCATTTGGGTTTTTCCAACTTCCTAATGAGCTTTTTTTGTTGGCAATATGGTATGACAAAGTGCCAAATGGAACCATTATTTGGCATGCAAATGGAGAAAACCCTGCTCCTATAGGATCAAGGTTAGAGCTAAATGGTTCCCGTGGACTAGTACTTAGCAACCCACAAGGTTTAGAGCTATGGAGTTCAAATTTTACTTCAGGTACAATTTTTAATGGTCTAATGAATGATGATGGAAATTTCCAACTGTTAGATCAAAATTTTGTGTCACTATGGGAGAGTTTTGCGCATCCAACTGACACATTGGTACCTACTATTGGCACCTACTCAATGGAATTAAATGGAGAACTTTCTTCTCGGCATGGAGAATTTAACTTCTCACGTGGAAGGTTCAAACTTCGTTTACAAGAGGATGGGAATGTTGTGCTAAACCATATCAATCTACATAGCAACTACAATTATAAGCCTTACTATGATACTGGCACTGCTGATGCTTCTAACCAAACAAATGTTGGCATGAAATTGATATTTGACAAGTCAGGCTTCTTATACATACTGAAGAAAAGTGGGGAAAAGTTTTATATCACTAAGCCAAATGAGACGGTCTCAACTGATGACTTTTATTACAAAGCAACAATAAATTATGATGGGGTTTTTACCATATCTTATTATGCCAAAGATCCAAGAAATGGACAAAGATGGGTCACTATAAAGACTATACCAGAAAATATTTGTCTAAATTCTGATTTCAGTAATGGTGAAGGTGTTTGTGGGTTTAATAGCATATGCAATCTCAAAGATGACCAAAGGCCAATGTGTAATTGCCCAGAGGGATATTCTTTAATTGATTCAAATAACATGTATGGTGGTTGCATGCCAAATTTCCAAGAAGGTGGATACGTGGGATCACAAGATGATTACATGATGAAGGAATTAGAAAACACTGATTGGCCTACTTCTGATTATGAAACATTAAGTCCCAGTAGTCTAAAAGAATGCACAAAGTCTTGTTTAGAAGATTGTTTATGCGTGATGGTTACTTTTAGTGGAAAATCTTGCTGGAAGTATAAGCTGCCACCCGCAAATGTGAGAAGAGGTAAGGAAGTAACTGGAACTTCTCTAATAAAATTGATGAAAGATAATAACCATTTTACCCCTTTATCAAACCCAAATGAGAAGAAAGGTCATAATGTCTTGATTATTGTGATATCAGTTCTTCTAGGCAGCTCTATGTTGATAATTCTAATGTTGGTTGGTGCAATATATTTTGGTTTCTTTAACAACCACAAAATGATACAAAATAATAGAACCAACAATAGTGTCATTGACAAAAAATTGCGTAATTTTACTTTCAAGGAACTTCTAGAGGCAACAAACAACTTTAAAGAAGAATTGGGAAGGGGATCTTTTAGCATTGTCTACAAAGGAACAATAGAGACGACTACTGTGGCTGTTAAAAAATTGGACAAGTTCTTCAAAGATAATGATAAGGAATTTCATATTGAAGTCAACGTAATAGGCCAAACTCATCATAGAAACCTAGTTCGTCTACTTGGATATTGCAATGAAGGACAACATCGAATTCTGGTATATGAATTTATGAGCAATGGCACCTTAGCAAGTTTCCTTTTCACTCCTTTGAAATCAAATTGGAATCTACGATTTGACATTGCCCTTGGGATTGCAAGAGGAATGTTCCAAATCATTCACTGTGACATAAAACCACAAAACATACTTTTAGATGATCAATATAATGCTAGAATTTCAGATTTTGGGTTAGCAAAACTATTATTGATCAATCAAAGTCACACTGAAACTGGAATTAGAGGAACAAAAAGGTATGTTGCACCAGACTGGTTTAGAAGTGCACCTATCACTACTAAGGTTGACACTTATAGTTTTGGTGTGGTGTTACTAGAGATCATTTGTTGTAGAAGGAATATAGAAAAAGAACTTGTTAATGAAGAGAGAGGGATATTAACTGACTGGGCATATGATTGCTACAAGACCAGAAGAATAGATGTTCTCCTAGAAAATGACGGTGAATATATTAATGACATCAAGATCTTTGAAAAACTTGTGATGATTGCTATTTGGTGCATTCAAGAAGATCCCTCTCTCAGGCCAACAATGAAGAAGGTTTTATTGATGCTAGAAGGAGTAGTTGATGTTTCAATACCTCCTAATCCCTACCTTCATGGTTCTGAAAAT 2434 0.3636 MGIREEVVKEVWKEIEKRRDDGWEKSMIVLHGYTKLKKGPYLTSRMSRSVGDSLIAGNGTSRWLSPSRDFAFGFFQLPNELFLLAIWYDKVPNGTIIWHANGENPAPIGSRLELNGSRGLVLSNPQGLELWSSNFTSGTIFNGLMNDDGNFQLLDQNFVSLWESFAHPTDTLVPTIGTYSMELNGELSSRHGEFNFSRGRFKLRLQEDGNVVLNHINLHSNYNYKPYYDTGTADASNQTNVGMKLIFDKSGFLYILKKSGEKFYITKPNETVSTDDFYYKATINYDGVFTISYYAKDPRNGQRWVTIKTIPENICLNSDFSNGEGVCGFNSICNLKDDQRPMCNCPEGYSLIDSNNMYGGCMPNFQEGGYVGSQDDYMMKELENTDWPTSDYETLSPSSLKECTKSCLEDCLCVMVTFSGKSCWKYKLPPANVRRGKEVTGTSLIKLMKDNNHFTPLSNPNEKKGHNVLIIVISVLLGSSMLIILMLVGAIYFGFFNNHKMIQNNRTNNSVIDKKLRNFTFKELLEATNNFKEELGRGSFSIVYKGTIETTTVAVKKLDKFFKDNDKEFHIEVNVIGQTHHRNLVRLLGYCNEGQHRILVYEFMSNGTLASFLFTPLKSNWNLRFDIALGIARGMFQIIHCDIKPQNILLDDQYNARISDFGLAKLLLINQSHTETGIRGTKRYVAPDWFRSAPITTKVDTYSFGVVLLEIICCRRNIEKELVNEERGILTDWAYDCYKTRRIDVLLENDGEYINDIKIFEKLVMIAIWCIQEDPSLRPTMKKVLLMLEGVVDVSIPPNPYLHGSEN 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01879 807 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 54 799 - -
Pste3g01879 807 Gene3D Transferase(Phosphotransferase) domain 1 604 795 - -
Pste3g01879 807 Pfam D-mannose binding lectin 95 176 IPR001480 -
Pste3g01879 807 ProSiteProfiles Protein kinase domain profile. 529 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01879 807 ProSiteProfiles Bulb-type lectin domain profile. 39 166 IPR001480 -
Pste3g01879 807 FunFam Serine/threonine-protein kinase 43 167 - -
Pste3g01879 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Pste3g01879 807 Gene3D Phosphorylase Kinase; domain 1 493 603 - -
Pste3g01879 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 232 IPR036426 -
Pste3g01879 807 SUPERFAMILY Protein kinase-like (PK-like) 508 795 IPR011009 -
Pste3g01879 807 FunFam Serine/threonine-protein kinase 169 318 - -
Pste3g01879 807 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Pste3g01879 807 SMART serkin_6 529 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01879 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 604 796 - -
Pste3g01879 807 FunFam S-receptor-like serine/threonine-protein kinase 498 603 - -
Pste3g01879 807 PIRSF SRK 39 806 IPR024171 GO:0004674
Pste3g01879 807 Pfam Protein kinase domain 531 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01879 807 SMART blect_4 53 168 IPR001480 -
Pste3g01879 807 Gene3D - 180 308 IPR036426 -
Pste3g01879 807 Gene3D - 49 166 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01879 Pste-Chr3 12566489 12571769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01879 504 788 Glycoside Hydrolase AT3G07070 40.129 2.07e-59 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste3g01879 Pkinase 1.1e-41 CL0016