Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01874 ATGAATTGTATAATTGAAACTGGAACAGATGATCAAGAGAAGTTGCCTGTCATTCAAGACAAAAAAATCATAGACATTCATAATCTTGGATTGACCTATGAATCCCCAAAACCCCTTGGTTTTTCCTCATGGGAAGGTATCTTAGAAAATAATGCTGGAAGTCAACCTGTGCCTTTTCAGCCTTTATTTCCTGAAGCTCAACCTAATAACATGGGAATCAATAGAAGTTTTTCTCAAGGAGTAATGGTGCCACATTTGACCACCTGCATTGCTAAGCTGCAAGAAATGGAACTCTCAAACAAGCTGAAGGAAATTCGCAGGTATTGTGTACTGGCTTATGGTGTTGATTCTTTACGAATGTCCTGTCGGGCTATAGATAGTCTGTATACAGGCTCAACATGTGAGGTTAGTTGTAGCAACCGTAAACAGGAAGTTAAAGAAGTTGATTTTCAGAAATCCTTGGAACAGTGTCTTTTACATCCACACAAACAAAACAAAGTTCTCATGCAAAATGATCCTCAGGAAAATCTTTTGAATACAACAGAAAAACTAAAATCGGATCTAGAGGCCAGTAGAACCCAGGATGGAATAGAAGACACATTTTTCAATTTTAAAAGGACTCTGATAGATGAACCTCCTGCAGAAGAGGGTCTGAAGAAGCTTGACAGTTTCAACCAATGGATGAGTAAAGAACTTGGAGATGTGGAAGAATCAAATAAACCATCCAGTTCTGGTGGTTATTGGGATACAGTTGAAAGCGGAAATGAGGTTGGCAGCACAACTATTTCATCCCAAGGGCACCTGGACACCTATGTATTGGATCCGTCTGTTTCCAATGATCAGCTTTTTACCATTATTGACTATTCCCCAAGCTGGGCATTTGAAGGGTCAGAAATTAAGGTTATCATTTCTGGAGGATTCTTAAGAAGTCAACATGAAGTAGAACAATGTAAATGGTCATGCATGTTTGGCGAGGTAGAAGTGCCAGCAGAAATAATCGCGAATGGTGTTCTTTGTTGTCATACTCCTCCACACAAGGCTGGGAGGGTACCTTTCTATGTAACCTGTTCCAATAGGCTAGCATGTAGTGAAGTGCGAGAATTTGATTTCCAAGTCAACTATACTCGAAAAGTCAATGCTGCAGGTGAAAATAGAGCCAGCACTTTTGATACTTTTAGTATACGATTTGGAGAACTGTTGTCCCTGGGGCATGCCTTTCCTCAGAATTCAGATTCAATCAGTTTAAGTGAGAAATCTCAACTGGGAAGTAAAATCAGTTCTTTGTTAAGGGGGGAGGATGATGATTGGAACAAGCTACTGAAACTTACTCTGGAGAAAGATTTTTCTCCAGAAAATTTACAGGAGCAACTGCTTCAAAATCTTCTGAAAGATAAATTGTGTGCATGGCTCCTTCAGAAAATAAACGAAGATGGGAAAGGCCCTAATGTACTAGATGAGGGTGGCCAAGGTGTGCTTCATTTTGCAGCTGCTCTCGGCTATGATTGGGCACTAGAACCCACAATAGCTGCCGGTGTGAATGTGAACTTTCGTGATGTAAATGGATGGACTGCTCTTCATTGGGCAGCATTTTGTGGCAGAGAGCGCACAGTTGTTTTCCTCATCTCTCTTGGTGCAGCACCTGGAGCACTGATTGATCCATGCCCGGAATATCCTTCTGGTAGGACACCAGCTGACTTAGCTTCTGCAAAAGGACACAAAGGAATTGCAGGGTATCTTGCAGAATCTACACTAAGTGCACACCTCACAACTATTGATTTGAACGGGGATGCAGGAGAAAATTCTGGAACAAAAGTAGTTCAAAGAATTCAAAACATTGCTCAAGTTAATGGTCTTGATGATCTATCATATGAACTGTCATTGAAAGATTCATTGGCTGCAGTGTGCAATGCTACCCAAGCTGCGGCTCGTATTCATCAAGTTTACAGAATGCAGTCATTCCAGAGAAAACAAGTGAAGGAATATGGTGATGACAAATTTGGAATATCTGATGAACGTGCACTTTCACTTTTAACAATGAATGTGAAATCACACAAGTCTGGACCACGTTATGAGCCGGTCCATGCTGCTGCAATACGAATCCAGAACAAATTCCGCAGTTGGAAGGGGAGAAGAGAATTTTTGATGATTCGACAACATATAGTAAAAATTCAGATCTTTCTAGGCCTTTTGGCTAAGGCTCACGTGAGAGGTCACCAGGTTAGGAAAAGCTGTGTGAAGATAATTTGGTCTGTTGGAATCTTGGAGAAGGTTATTTTACGTTGGCGTCGAAAAGGTAGTGGCCTGCGTGGATTTAAACCGGAAGCCAATTATGAGGGAACTATGATACAAGATGTATCCTCCACAGAGGATGACTACGACTTCTTAAAGGAAGGCAGGAAGCAAACTGAGCAAAGGTTGCAGAAAGCCTTAGCTAGGGTGAAGTCAATGGTTCAATATCCAGAGGCAAGAGATCAATACCATAGGCTGTTGAATGTGGTAACTGAGATACAAGAAAATCAGGTAAAGCTTGAGAGCAGTTTTAACAATTCAGACGAACCAAAGGAATTCGGCAACCTCACCGATCTTGAATTGGATGAAGATATTCTCATGCCTACAGCAACTTAGAAGTTAGCTTATATTAATTGTATGGCTTACACTTTAACCTCAGAGTTAGGTGATGAACCGTCTCACTTGCGTAAGATTAATTCTAATTCTTTTTGTTAAAGGGTCACATGCTAACCATTAAAACCATTTTTACATTTATAAAAGTATTAACGGAATTGTGAAGCCAATTTTTCAATCTGAGCTGTTAGAAGGAACCACGGTTTCTTTACCAATCAGAGATTGCCTGATATTCGAGTGAGCAACATAAGATTTAGAACCCATTTGAAACAAGTGAAAAAGAGACGAGGTTGTTAATTAACCAAAGAATGCCTCACTATAACCGAAGTGTTTGGTCAAACTACAAAATATAAATAATTTAACGAGCAGGACCAATTTCCATTTCATTGTGTTTCTAATGCTGGTTGAACGTTTGCAACCATGAATACACATCGTTGGTGAAATTTTCACCCGATATATATACTGTTCTTATTGTGAGAGGAAAAAGAAAGGACAGTGCTACCACTATCCACTGTACATGCCAACCACATAAGTATACATTTTCACAACCCGTATCCTCTGAAGGATGTAACAGCTCCTCCAACAGGTTGAATAAAAGGAAAACGGTAAAAAGGAATAAATATGGAAACCAAGTGAAAAAGAAGTCCAAATGATTAAAGTATCGAAGAGTTGTAGAACTCCTCCGTCTAATTCCT 3317 0.3998 MNCIIETGTDDQEKLPVIQDKKIIDIHNLGLTYESPKPLGFSSWEGILENNAGSQPVPFQPLFPEAQPNNMGINRSFSQGVMVPHLTTCIAKLQEMELSNKLKEIRRYCVLAYGVDSLRMSCRAIDSLYTGSTCEVSCSNRKQEVKEVDFQKSLEQCLLHPHKQNKVLMQNDPQENLLNTTEKLKSDLEASRTQDGIEDTFFNFKRTLIDEPPAEEGLKKLDSFNQWMSKELGDVEESNKPSSSGGYWDTVESGNEVGSTTISSQGHLDTYVLDPSVSNDQLFTIIDYSPSWAFEGSEIKVIISGGFLRSQHEVEQCKWSCMFGEVEVPAEIIANGVLCCHTPPHKAGRVPFYVTCSNRLACSEVREFDFQVNYTRKVNAAGENRASTFDTFSIRFGELLSLGHAFPQNSDSISLSEKSQLGSKISSLLRGEDDDWNKLLKLTLEKDFSPENLQEQLLQNLLKDKLCAWLLQKINEDGKGPNVLDEGGQGVLHFAAALGYDWALEPTIAAGVNVNFRDVNGWTALHWAAFCGRERTVVFLISLGAAPGALIDPCPEYPSGRTPADLASAKGHKGIAGYLAESTLSAHLTTIDLNGDAGENSGTKVVQRIQNIAQVNGLDDLSYELSLKDSLAAVCNATQAAARIHQVYRMQSFQRKQVKEYGDDKFGISDERALSLLTMNVKSHKSGPRYEPVHAAAIRIQNKFRSWKGRREFLMIRQHIVKIQIFLGLLAKAHVRGHQVRKSCVKIIWSVGILEKVILRWRRKGSGLRGFKPEANYEGTMIQDVSSTEDDYDFLKEGRKQTEQRLQKALARVKSMVQYPEARDQYHRLLNVVTEIQENQVKLESSFNNSDEPKEFGNLTDLELDEDILMPTAT 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01874 874 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 142 839 - -
Pste3g01874 874 Pfam IPT/TIG domain 284 360 IPR002909 -
Pste3g01874 874 SMART ANK_2a 559 588 IPR002110 GO:0005515
Pste3g01874 874 SMART ANK_2a 520 549 IPR002110 GO:0005515
Pste3g01874 874 Gene3D - 446 608 IPR036770 -
Pste3g01874 874 ProSiteProfiles IQ motif profile. 694 722 IPR000048 GO:0005515
Pste3g01874 874 Coils Coil 792 812 - -
Pste3g01874 874 Gene3D Immunoglobulins 277 374 IPR013783 -
Pste3g01874 874 FunFam Calmodulin-binding transcription activator 2 278 374 - -
Pste3g01874 874 SUPERFAMILY E set domains 284 370 IPR014756 -
Pste3g01874 874 Gene3D - 692 748 - -
Pste3g01874 874 FunFam Calmodulin-binding transcription activator 2 692 748 - -
Pste3g01874 874 SUPERFAMILY Ankyrin repeat 476 582 IPR036770 -
Pste3g01874 874 ProSiteProfiles Ankyrin repeat profile. 520 545 IPR002110 GO:0005515
Pste3g01874 874 ProSiteProfiles Ankyrin repeat region circular profile. 520 545 - -
Pste3g01874 874 Pfam Ankyrin repeats (3 copies) 492 589 IPR002110 GO:0005515
Pste3g01874 874 FunFam Calmodulin-binding transcription activator 2 449 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01874 Pste-Chr3 12524412 12529158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01874 204 851 CAMTA Transcription Factor Family AT2G22300 56.839 0.0 694