Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01848 ATTCTGCATAAACGAACCAAAATGCGAAGCTGCGTCAACCTCTGGATCCTGGTCGCACTGGTCGTCCCTGTGCTCCTCTCTCTCAGAAGCCCCAGAGGAGAAACACAAACACAAACACAAACACAAACTGTAACCCAAACTCATACCACTTCTCCTTCCTCCTCTGCTTTCTCTGATTCTTCTTCCTTCTCCGTGAAGCTTGCAAATTCCTTTCCTTTTAACCAAAGGATTCGAGATGGCTCAAATCTCCGCTACGATTTCTACAGGGACACGTGTCCCCAAGCCGAGGCTATCGTCCGCTCTGCCCTCACTCGCGTCTACTTCGACCACAGGGACGTTGCACCTGCTCTCCTCCGTCTCTTCTTCCACGATTGCTTCATCCAGGGGTGTGATGCTTCGTTGTTGTTGGATGAGAACAATGGTGATAGAAACCGTTCTGTGGAGAAGAAAGCTGTGCCAAATCAGACATTGAGAGGTTTTGACAAAATTGATTTGATAAAGGAGGAGGTGGAGCAAGCATGTCCTGGGGTTGTGTCTTGTGCTGACATACTTGCTCTTGCGGCAAGAGATTCAGTTCTTCTGGCTGGTGGGCCTTTCTATCCAGTCTTAACAGGCAGAAGGGATAGCCATCAATCATTTTTTGAAGAAGCAACTGATCAGATTCCCAGACCTGATGATAACGTTACACGTACATTGCATCTCTTCAATCTGAGAGGATTTAATGCAAGAGAAACAGTCAGCCTTCTTGGAGGACACAACATTGGCAAAATTGGTTGTGATTTCATTCAGCAAAGGCTATACAACTTTCAAGGCACTGGACAACCAGACCCCAGTATACCACTTGACTTCCTTCGCCAGATGAGGATAAACTGTCCAGACAGCAAGAACTCCACAACCAGTGTGAACGAGTTTGTGATTTCAAAGCCAATGAACAGTCCCAAAATGGGGATGTCTTACATGCAAGCACTCTCATCATCAGTGTCTTCAGGTGCAGCATTCGATACTCACTACTACCAGAGCCTGTTAAGAGGAAGAGGACTTCTTTTTGCTGATCAGCAGCTCATGGCTGAGGAGAAAACTGCCAGATTAGTATCTGCTTATGCTTCAGATGATGGATCAACTTTTCGCATGGACTTTGCCAGGGTCATGTTGAAAATGTCTAATCTTGATGTTCTCACAGGACTTCAAGATGGTGTTTTTGCCTTGCCACTTGGTTCAGTTTTGTTAGACAGTGAAAGTGAAATGTTGGATTTTGAATCAGAGAGCACAACCCAATCATCATCTTCAAGTTGGAGCCACTGGCATAATGGTAAGGTTATTAGGGTGCATTCTCATCGTGCCCTTCTTTCAAAGGGCACGGTTCCACCTTCAAGTCCAAGTCAGAAGCATTATTAG 1395 0.4573 ILHKRTKMRSCVNLWILVALVVPVLLSLRSPRGETQTQTQTQTVTQTHTTSPSSSAFSDSSSFSVKLANSFPFNQRIRDGSNLRYDFYRDTCPQAEAIVRSALTRVYFDHRDVAPALLRLFFHDCFIQGCDASLLLDENNGDRNRSVEKKAVPNQTLRGFDKIDLIKEEVEQACPGVVSCADILALAARDSVLLAGGPFYPVLTGRRDSHQSFFEEATDQIPRPDDNVTRTLHLFNLRGFNARETVSLLGGHNIGKIGCDFIQQRLYNFQGTGQPDPSIPLDFLRQMRINCPDSKNSTTSVNEFVISKPMNSPKMGMSYMQALSSSVSSGAAFDTHYYQSLLRGRGLLFADQQLMAEEKTARLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGLQDGVFALPLGSVLLDSESEMLDFESESTTQSSSSSWSHWHNGKVIRVHSHRALLSKGTVPPSSPSQKHY 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01848 464 SUPERFAMILY Heme-dependent peroxidases 83 398 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 CDD secretory_peroxidase 82 394 IPR033905 GO:0004601|GO:0042744
Pste3g01848 464 Gene3D - 86 396 - -
Pste3g01848 464 ProSiteProfiles Plant heme peroxidase family profile. 82 398 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 Pfam Peroxidase 99 370 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PANTHER PEROXIDASE 25-RELATED 65 394 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 ProSitePatterns Peroxidases active site signature. 114 125 IPR019794 GO:0004601
Pste3g01848 464 FunFam Peroxidase 222 387 - -
Pste3g01848 464 PRINTS Haem peroxidase superfamily signature 326 341 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PRINTS Haem peroxidase superfamily signature 196 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PRINTS Haem peroxidase superfamily signature 114 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PRINTS Haem peroxidase superfamily signature 178 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 MobiDBLite consensus disorder prediction 32 59 - -
Pste3g01848 464 FunFam Peroxidase 86 231 - -
Pste3g01848 464 PRINTS Plant peroxidase signature 196 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PRINTS Plant peroxidase signature 177 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PRINTS Plant peroxidase signature 116 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PRINTS Plant peroxidase signature 324 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PRINTS Plant peroxidase signature 92 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PRINTS Plant peroxidase signature 381 394 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PRINTS Plant peroxidase signature 340 357 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PRINTS Plant peroxidase signature 158 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 PRINTS Plant peroxidase signature 243 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste3g01848 464 Gene3D Peroxidase, domain 2 222 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01848 Pste-Chr3 12209933 12213929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01848 65 407 Peroxidase AT4G33870 43.956 8.80e-95 290