Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01839 CGCACCAACACCACTGGCTATGTTGATTGGATTGCCAACAACCACCCTTTTGTCCACAGTTCTGTGGCTCTAAAACTGAACCATTTTGGTGCTTTGATCCTTACAAGTCGAAATGATGACCCCATTATCCTCTATTCTCCTGTTGAAGCCACCAACAGAACCATTGCCACACTTCTGGATTCTGGGAACTTGGTGCTGAGAGAAGTTGATGGCAATGATTGTACTAAGAGTGTGCTGTGGCAGAGTTTTGACCACCCTGCTTCCATTCTGTTGTCAGGAATGAAATTAGGTGTCAATAAAAGAACTGGCATGTCTTGGATTGTTAAGGCATCAATTTCTGGGGCCAAGCTAGCTTTAGGTTCGTTTACACTTGAATGGGAACCAAGGGAAGGGCAATTGGTCAAAAAGAGGCAAGGGCAGGTGTATTGGGCAAGTGGGTTGCTGAAAAACAAGATATTTGAGAACATTCCTAAGGAAGTCCAACTAATGTATGAATACAACATTGTGTCAAATGAGGATGAAGAGTCCTTCAGTTACTCAGCTCTAAATAATATATCACAATTGGTGTTATTCCACAATGATATGAACAAGTGGATTGCTATCCTTGTTACCGCAGCAGCAGCAACACTTTTAATTGTCATTGCCTTCCTTTGTATTTTCTACATAATATTAAGGAGAAGAAAGGCTGCACTTAAAGATAACACTACAAGAACTGAAAATAAGATGCTTAAATTAGTGACTTTGGATAGACATGCTGCTAGTAAACTTCATAGTGAAAGTCTTCAGCTATGCATCAATCATGGCAATGACAAACAAGTTCTCAATAGAAAAGAAGGTAAATTGCCAACAGGAGAAGAGGTGGCAATAAAAAGACTATCAAAAGGTTCAGGACAAGGAGTTATAGAATTTAAAAATGAGTTAAACCTCATATCTGAACTCCAACACGTGAATCTTGTTCAGCTATTGGGTTGTTGTATCTATGGAGAAGAGAGGATGCTAATCTATGAGTACATGGCTAACAAGAGCTTGGACTTCTTTTTAGTTGGTGAGGAAGGAAATATAATTTTCACTTTAAAAATATCACATCTTCCCAAGATCGGATTGCTCTATCTCCATAAATATTCTAGGTTGCAAGTAGTTCACAGAGACTTGAAAACTAGCAACATACTTCTTGATGAAAATATGAATCCTAAAAAAATTTCAGATTTTGGCGTGGGAAGAATTTTCAGCCCACAGGAATCAGAAGTAAATGCTGGACGAATTATGTCACCTGAGTATGCAATGAGGGGTATTTTCTCAATCAAATCAGATGTCTATAGTTTTGGAGTTATGATGATTGAAATTGTTAGTGGAGGAAGAAGCACCAACTTCTACAATGGTGAACGCCAATGCATTCTGATAGGATATGCTTGGGAACTATGGCAACAAGGCAGCGTGCTAGAACTAGCGAATCCAACTATAATGGATTCATGTATTGAAGATCAAGCATTAAGGTGTATTCATGTAGGTCTGCTACGTGCAGAAGATGATGCAGTTGATCGACCAACCATATCAGATACCATAAACATGTTGACAAGTGAATATGCATCATTTCCTCTGCCTAGAAGACCAGCATTTTACAGTAGAAGAAAGCTTAATGAAGAATGCAGATCTACCAACGGTTCTGAATGTTACTCAGTGAATGGCTTGTCCATTTCCAACGTAGACCCAAGA 1713 0.3905 RTNTTGYVDWIANNHPFVHSSVALKLNHFGALILTSRNDDPIILYSPVEATNRTIATLLDSGNLVLREVDGNDCTKSVLWQSFDHPASILLSGMKLGVNKRTGMSWIVKASISGAKLALGSFTLEWEPREGQLVKKRQGQVYWASGLLKNKIFENIPKEVQLMYEYNIVSNEDEESFSYSALNNISQLVLFHNDMNKWIAILVTAAAATLLIVIAFLCIFYIILRRRKAALKDNTTRTENKMLKLVTLDRHAASKLHSESLQLCINHGNDKQVLNRKEGKLPTGEEVAIKRLSKGSGQGVIEFKNELNLISELQHVNLVQLLGCCIYGEERMLIYEYMANKSLDFFLVGEEGNIIFTLKISHLPKIGLLYLHKYSRLQVVHRDLKTSNILLDENMNPKKISDFGVGRIFSPQESEVNAGRIMSPEYAMRGIFSIKSDVYSFGVMMIEIVSGGRSTNFYNGERQCILIGYAWELWQQGSVLELANPTIMDSCIEDQALRCIHVGLLRAEDDAVDRPTISDTINMLTSEYASFPLPRRPAFYSRRKLNEECRSTNGSECYSVNGLSISNVDPR 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01839 571 ProSiteProfiles Protein kinase domain profile. 259 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01839 571 FunFam Uncharacterized protein 271 337 - -
Pste3g01839 571 Pfam D-mannose binding lectin 10 109 IPR001480 -
Pste3g01839 571 Pfam Protein tyrosine and serine/threonine kinase 283 455 IPR001245 GO:0004672|GO:0006468
Pste3g01839 571 FunFam Os07g0541700 protein 338 424 - -
Pste3g01839 571 Gene3D Phosphorylase Kinase; domain 1 232 337 - -
Pste3g01839 571 Gene3D Transferase(Phosphotransferase) domain 1 338 531 - -
Pste3g01839 571 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 150 569 - -
Pste3g01839 571 SMART serkin_6 259 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01839 571 ProSiteProfiles Bulb-type lectin domain profile. 1 79 IPR001480 -
Pste3g01839 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 379 391 IPR008271 GO:0004672|GO:0006468
Pste3g01839 571 Gene3D - 2 83 IPR036426 -
Pste3g01839 571 SUPERFAMILY alpha-D-mannose-specific plant lectins 8 147 IPR036426 -
Pste3g01839 571 SUPERFAMILY Protein kinase-like (PK-like) 281 545 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01839 Pste-Chr3 12140596 12144924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01839 226 571 Receptor kinase-like Gene Family AT4G11530 46.341 9.08e-89 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g01839 PK_Tyr_Ser-Thr 3.1e-32 CL0016