Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01806 AAATTTGAAAGAGAAAGGAAGGGAGAATTGGAAATGAATAATTTGGATTTGAAGAAGGCATCGTCTCAGAGCATTGACGCCTTTCATTGAATCGTAAGTTGGTTTCTGAAGCAATTGAGAGATATGGGAAAAGCAAAGGACAGAACAGAGGATTTCAAAGATGCCGTGCGCCACGCCGCTCGCTCCTTGGGCTACGACGAGGCTAAATTGGCGTCCATTATGGCATCTTTCATTATTCATAAACCCCCCCAAAGGTCCCCATTTTCCAAAGCTGCATTGATGACGCTGGAGAGTATTGGAGAGCTGGATCAGTTTTTGTCGAAGCATAGAAAGGACTACACCGATCTGCATCGCACGACTGAAAAGGAGAGAGATAGCATCGAACATGAAGTAAGTACTTTTATTAAAACATGCCAGGAACAAATTGATATTCTCAAGAATAGTATAAATCAAGAAGAGGAAACCTCAAAAGGTTGGCTTGGCATTGCAACCACAAAATCTAATGTTGACACCATTGCCCACAAACATGGAGTGGTTCTAATTTTAAGCGAGAGACTCCATTCAGTTACAGCACAGTTTGATCAGCTCAGAGCCACACGCTTCCAGGATGCTATTAACAAAGCAGTACCACGAAGAAAACTTAATCGTGTAACCAGGAAAGATTCTGCTGAAACCTCTAAATCAGGTGAGATGGAGCTCAGAGAACCTGAGGATTTACAAGCTGAGCCTCTAAGAGTCCAACAACAACTCTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTGACAAGTCTTCTCGATACAGTTCAAGAAACAGAAACTAAGATGGTGGAAATGTCGGCATTAAATCACCTCATGTCTACACATGTTTTGCAACAAGCTCAGCAAATTGAGCATCTGTATGAGCAGGCTGTTGAAGCTACTAAGAATGTTGAGCTTGGTAACAAAGAACTCTCACAAGCCATTCAGAGGAATAGCAGTAGCAGGACATTTCTTTTACTTTTTCTATTTGTGCTTACTTTTTCTATCCTTTTTCTTGATTGGTATAGTTAAATGCCTTTTGTTTTTTTGCTATCAATGTGTATGTTCTTATAGACACTCCCTGCTCCCTCTCATTTTCCCCTATTTCTGTCAATATCTGTTTTTACCATTAGGAAGGCATCTTTTTCCAGATGCGATATGTTTAGGGAAAAAACTAGTAATCAATTTATGAAGGGAATGACAAAAGGAGACCTACCTACTGTTTTGTAGGAAAGGAGGGAAATCAAAATATCTTATTTGGTTTGTAATTTTGGATTAGAGATAAGGAAAGAGATATTGTAGCACCCAATTATCTAATGGTGA 1344 0.3988 MGKAKDRTEDFKDAVRHAARSLGYDEAKLASIMASFIIHKPPQRSPFSKAALMTLESIGELDQFLSKHRKDYTDLHRTTEKERDSIEHEVSTFIKTCQEQIDILKNSINQEEETSKGWLGIATTKSNVDTIAHKHGVVLILSERLHSVTAQFDQLRATRFQDAINKAVPRRKLNRVTRKDSAETSKSGEMELREPEDLQAEPLRVQQQLLDDETRALQVELTSLLDTVQETETKMVEMSALNHLMSTHVLQQAQQIEHLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01806 309 FunFam Syntaxin-81 like 212 306 - -
Pste3g01806 309 SUPERFAMILY t-snare proteins 57 273 IPR010989 GO:0016020|GO:0016192
Pste3g01806 309 Gene3D - 212 306 - -
Pste3g01806 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Pste3g01806 309 PANTHER SYNTAXIN-18 1 309 - -
Pste3g01806 309 Coils Coil 94 114 - -
Pste3g01806 309 MobiDBLite consensus disorder prediction 174 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01806 Pste-Chr3 11708679 11712076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01806 67 309 SNARE and Associated Proteins AT1G51740 73.361 4.09e-112 323