Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01792 ATGAAGCATTTTTTTCTCATGATACTTGCATTTTGGCCTATACATATTCATCCTTTTTCTCTCTTTGCTTTGTATCCATTATGGTTTACTCCAACCACAACTGTCTTTGCACCGGGGAACGAGACTGATCATTTGGCACTCCTCAAATTCAAAGAATCCATATCTTCAGATCCATATGGAATCTTAATTTCTTGGAATAGTTCTACTGATTTTTGTAAGTGGCATGGAGTCATATGTAATTCCATGCTTCAAAGAGTTACAGAGTTAAACTTGCAAGGATACAAGTTGGCAGGATCCATATCTCCTCATGTTGGCAATCTCTCTTATGTGAGAAACTTCAATCTGGCAAACAACGACTTCTACAAGAAAATTCCACAAGAATTAGGACGAATGTCACAATTGCAGAACCTCTTTGTTGGTAACCAAATATCAGGAGAAATCCCTGCATCTATTGGAAACCTAATTAGCTTAACTGTTTTCTCAATATACTATAACTGCATTAATGGAATTATCCCAACAACTTTTGGGAAGTTTCAACAAATGCAAGTGTTGGGATTAACAGGAAACAAGCTATCAGGAGAGATGGGAACCTTTATAGGCAACCTTAGTCATTTGTTTTGTTTAGAAATGGGAGCAAATATGTTAGAAGGAAGTATTCCTCCAAGTATAGGAAACTGTCAAAAGTTACAATACTTAGACCTTGCACACAACAACCTCAGAGGAACCATACCCTTAGAGGTTTTTAATCTTTCTTCTTTGACAAATTGGTTGGCCTTGTCACAAAACTCACTGAGTGGTAGTATACCCGAAGAAGTAGGCAACCTACAACATCTTGATTTGCTAGATTTTTCTAAGAATCATTTGTCTGGTCACATTCCTAGAGCTATAGGAGAATGTGTGATGTTGGAGTATCTCTATTTGCAAGGAAATTCTTTAAATGGAATCATACCATCCTCTATAGCATCACTCAAAAGTCTTCAAGAATTAGACCTTTCACGAAATCTTATATCAGGATCAATTCTTAATGTTCTACAAAATATTTCTTTCTTACGATACTTCAATGTATCTTTTAACATGTTGGATGGTGAGGTACCAATGGAAGGTGTCTTTCAAAATGAAAGTGGATTAGTGTTGACTGGAAATAGTAAACTTTGTGGAGATTACAAAGGTCAAGAATTTAAAGCTATAATCTTTGAGTACATGAGAAATGGAAGCTTAGAGGAATGGTTACATCCTAACACTTCAAGTGAAAAACATCCCAGAATGTTGAACCTTGATCAAAGATTAAATATCATGATTGATGTTGCTTCTGCCTTACATTATCTTCATTATGAATGTGACCAATTGATCATTCATTGTGATTTAAAGCCAAGCAATGTCCTTCTTGATGACGACATGATTGCTCATGTGAGTGATTTTGGCATAACAAAACTTTTTCAACCATTAATGGTACCACTTCTAAACAAACAAGTACAATTGGAATACAAGGGACCATTGGCTATGCTCCTCCAGAATGGAGTGAGTTATGAGGTGTCTATAAATGGCGACATGTATAGCTTTGGGATTCTTATGTTGGAAATGCTTACCGAAAGAAGACCTACAGATGAAATATTTAAATGTGGTCAAAATATGCACCACTTTGTGAAAAATTCAACTTTTGGTGATCTTTTACAAATTTTGGATCCATCACTTGTACCAAAAGAAGGAGAAGCAACTGCAGAAGAAGAAAAATGTCACAATATTACTCAAAATATTGAAAAGTGCATAATTTCACTTTTTAAGATTGGACTTGTTTGTTCAGTGGAATCACCAAAAAAAAGAATGAATATGGTTGATGTCATCAGAGAGCTAAACAAAATCAAAAGATCATTTCTTACTGCCCAAAAGCTCCGGGGCCAGCTTCTGTCCACGGCGGCGGAGGCGGCGGAAGTAACCGAGCAGGATGGGAGCAAGTCGAAGTCGTCGGGATTGACGATGAAGGGCGTGGAAATCTCCGGAAGACCACTTTACCTGGACGTGCAGGCGACATCTCCGGTGGACCCGCGCGTTATGGATGCGATGCTCCCTTTCTATCTCTCTCGCTTCGGAAACCCTCACTCTCGCACCCACTTCTACGGCTGGGAATCCGACGAGGCGGTGGAGCACGGACGCGGTCAGGTGGCGTCTCTCATCGGCGCGTCCGCAAAGGAAATAGTGTTCACCTCCGGCGCCACGGAGTCTAACAACATCTCTGTGAAGGGCGTGATGCATTTCTACAAGGACAAGAAGCGGCACGTGATCACGACGCAAACGGAGCACAAGTGCGTGCTGGATTCCTGCCGCCACCTTCAGCAGGAGGGTTTCGATGTTACTTATCTTCCCGTTCAGTGTGATGGTTTGATTGATTTGGACAAGCTTAGGGCTGCGATTAGGCCCGATACGGGGCTTGTTTCGGTTATGGCGGTGAATAATGAAATTGGAGTGGTTCAGCCGATGGAGGAAATTGGGAGGATTTGCAAGGAGTTCAATGTTCCGTTTCACACTGATGCTGCTCAGGCGTTGGGGAAGATTCCCATTGATGTGGACAAGTGGAACGTGAGCTTGATGTCGCTGAGTGGGCATAAGATATATGGGCCTAAAGGGGTTGGGGCTTTGTATCTTCGTCGTAGGCCCAGGATTCGGGTTGAGCCTCAGATGAATGGGGGTGGCCAGGAGAGGGGTATCCGGAGTGGGACTGTTCCCACCCCTTTGGTTGTGGGGATGGGTGCGGCGTGTGAGGTTGCTAAGAATGAGATGGAGTATGACCACAAGAGAATTGCTGCTTTGCAGCATAGACTTCTTAATGGGATTAGAGATAAGCTTGATGGGGTGGTCGTCAATGGGAGCATGGAGAACCGCTATGTTGGGAATTTGAATCTTTCATTTGCTTATGTTGAAGGGGAGAGTTTGCTTATGGGGTTGAAGGAGGTGGCTGTGTCCAGTGGCAGTGCTTGTACCAGTGCTAGTTTGGAGCCTTCCTATGTGCTGAGGGCTTTGGGAGTGGAGGAGGACATGGCTCACACTTCTATTAGGTTTGGAATTGGGAGGTTCACCACCGAGGCTGAAATTGACAGGGCTGTGGACCTCACTGTTCAGCAGGTTCAGAAGTTGAGGGACATGAGTCCACTTTATGAAATGGTCAAGGAAGGCATCAACATCAAGGAGATTCAATGGGCTCAGCACTGA 3204 0.427 MKHFFLMILAFWPIHIHPFSLFALYPLWFTPTTTVFAPGNETDHLALLKFKESISSDPYGILISWNSSTDFCKWHGVICNSMLQRVTELNLQGYKLAGSISPHVGNLSYVRNFNLANNDFYKKIPQELGRMSQLQNLFVGNQISGEIPASIGNLISLTVFSIYYNCINGIIPTTFGKFQQMQVLGLTGNKLSGEMGTFIGNLSHLFCLEMGANMLEGSIPPSIGNCQKLQYLDLAHNNLRGTIPLEVFNLSSLTNWLALSQNSLSGSIPEEVGNLQHLDLLDFSKNHLSGHIPRAIGECVMLEYLYLQGNSLNGIIPSSIASLKSLQELDLSRNLISGSILNVLQNISFLRYFNVSFNMLDGEVPMEGVFQNESGLVLTGNSKLCGDYKGQEFKAIIFEYMRNGSLEEWLHPNTSSEKHPRMLNLDQRLNIMIDVASALHYLHYECDQLIIHCDLKPSNVLLDDDMIAHVSDFGITKLFQPLMVPLLNKQVQLEYKGPLAMLLQNGVSYEVSINGDMYSFGILMLEMLTERRPTDEIFKCGQNMHHFVKNSTFGDLLQILDPSLVPKEGEATAEEEKCHNITQNIEKCIISLFKIGLVCSVESPKKRMNMVDVIRELNKIKRSFLTAQKLRGQLLSTAAEAAEVTEQDGSKSKSSGLTMKGVEISGRPLYLDVQATSPVDPRVMDAMLPFYLSRFGNPHSRTHFYGWESDEAVEHGRGQVASLIGASAKEIVFTSGATESNNISVKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFDVTYLPVQCDGLIDLDKLRAAIRPDTGLVSVMAVNNEIGVVQPMEEIGRICKEFNVPFHTDAAQALGKIPIDVDKWNVSLMSLSGHKIYGPKGVGALYLRRRPRIRVEPQMNGGGQERGIRSGTVPTPLVVGMGAACEVAKNEMEYDHKRIAALQHRLLNGIRDKLDGVVVNGSMENRYVGNLNLSFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVEEDMAHTSIRFGIGRFTTEAEIDRAVDLTVQQVQKLRDMSPLYEMVKEGINIKEIQWAQH 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01792 1067 Gene3D Aspartate Aminotransferase, domain 1 670 1031 IPR015422 GO:0003824
Pste3g01792 1067 Gene3D Ribonuclease Inhibitor 256 393 IPR032675 -
Pste3g01792 1067 NCBIfam IscS subfamily cysteine desulfurase 667 1067 IPR010240 GO:0030170|GO:0031071|GO:0044571
Pste3g01792 1067 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 401 630 - -
Pste3g01792 1067 Gene3D Ribonuclease Inhibitor 161 255 IPR032675 -
Pste3g01792 1067 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Pste3g01792 1067 FunFam Cysteine desulfurase IscS 917 1031 - -
Pste3g01792 1067 Pfam Leucine rich repeat 302 360 IPR001611 GO:0005515
Pste3g01792 1067 Pfam Aminotransferase class-V 670 1031 IPR000192 -
Pste3g01792 1067 SUPERFAMILY L domain-like 140 386 - -
Pste3g01792 1067 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Pste3g01792 1067 Hamap Cysteine desulfurase IscS [iscS]. 665 1058 IPR010240 GO:0030170|GO:0031071|GO:0044571
Pste3g01792 1067 Pfam Protein kinase domain 392 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01792 1067 ProSiteProfiles Protein kinase domain profile. 290 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01792 1067 Gene3D Ribonuclease Inhibitor 42 154 IPR032675 -
Pste3g01792 1067 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 137 395 - -
Pste3g01792 1067 SUPERFAMILY L domain-like 40 140 - -
Pste3g01792 1067 Gene3D Transferase(Phosphotransferase) domain 1 401 636 - -
Pste3g01792 1067 FunFam Cysteine desulfurase IscS 680 925 - -
Pste3g01792 1067 SUPERFAMILY PLP-dependent transferases 668 1054 IPR015424 -
Pste3g01792 1067 SUPERFAMILY Protein kinase-like (PK-like) 388 617 IPR011009 -
Pste3g01792 1067 PANTHER CYSTEINE DESULFURYLASE FAMILY MEMBER 661 1047 - -
Pste3g01792 1067 Gene3D - 680 925 IPR015421 GO:0003824
Pste3g01792 1067 SMART serkin_6 329 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01792 Pste-Chr3 11581826 11588643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01792 387 628 Receptor kinase-like Gene Family AT5G20480 36.585 1.86e-40 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste3g01792 Aminotran_5 3.7e-83 CL0061