Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01784 TGGGGACATTATATATATAACCCCATTCGACAGTTGCTTGACTCAATAGCTAGCAATAGCATGATTTGGATAGCAATTTTGTTGGTTTGTCTTGGTTTTGTGTGGATATGGAGAAGCAAGAACATGGAAAAGAAGTTACCACCCGGTCCCAGAGGGTTGCCAATTTTGGGAAGCCTTCATTTGTTGGGAGCAAATCCTCATCGTGACTTGCACCAACTAGCCCAAAAATATGGACCTGTGATGTACTTGCGCTTAGGTTTTGTTCCCACCATAGTTGTTTCTTCTCCCCAAGCTGCTGAACTCTTCCTCAAGACCCATGATGTTGTCTTTGCCAGTAGACCACCTCATGAAGCTGCAAAACACATTTCTTGGGACCAGAGGAACTTAAGCTTTGCTGAATATGGTTCTTATTGGCGCAACGTGCGCAAGATGTGCATCTTGGAATTGCTGAGCCAAACCAAAATTAACTCCTTCAGAAGCATGAGAGAAGAGGAGCTTGACCTACTGATAAAACTTGTAAGAGAGGCAGCCAATGATGGAGCTGCTGTTGATCTCAGTGCCAAAGTTGCTACACTCAGTGCAGACATGTCTTGTAGAATGGTTTTAGGAAAGAAGTACAAGGACCGGGACATCGACGAGAAGGGGTTCAAGCGTGTGATCCAAGAGGGAATGCATTTAACAGCAACACCTAACATGGGAGATTACATTCCTTATATTGCCGCACTTGACCTTCAAGGCCTAACTAGGCGCATGAAAGTAGTTGCCAAAATCTTCGACGACTTCTTCGAGAAAATTATCGATGACCACATGCAATCAGACAAGGGAGAAGACAAGACCAAGGATTTCGTGGATGTCATGTTGGGCTTTCTGGGTACCCAAGAATCTGAATACCGCATTGAACGCCCCAATATCAAAGCCATACTGTTGGATATGTTGGCTGGTTCAATGGATACTTCTGCGACAGCAATTGAGTGGACACTTTCAGAGCTGCTAAAGAATCCAAGGGTGATGAAAAAAGTCCAAATGGAGTTGGAAAGTGTGGTAGGTAGAAAGAGGAAGGTGGAGGAATCGGACTTGGAGAAGTTGGAGTATTTGGACATGGTTATAAAGGAAAGCATGAGGGTCCATCCAGTGGCACCGTTGCTAATACCACACCAGTCCACGGAAGAGTGTATGGTTGGAGAGTTTTTGATACCTAAAGAATCAAGGGTGATAGTGAATGCATGGACAATTATGCGAGATCCAAGTGCTTGGAATGAGGCAGACAAGTTCTGGCCTGAGAGATTTGAGGGAAGGAACATTGATTTGAGAGGGCGTGACTTCGAGCTTATACCCTTTGGATCTGGTAGAAGGGGATGTCCAGGATTGCAATTGGGTCTCACTGTCATTCGTCTAACAGTGGCACAACTTGTCCATTGTTTTGATTGGAAACTACCAAATGACATGTTACCACATCAATTGGACATGACAGAGGAGTTTGGCCTCACCATGCCCAGGGCCAATCATCTGCATGCCATTCCTACTTATCGACTTTCTAATCAGACCAACTACCCAACATAA 1560 0.4474 WGHYIYNPIRQLLDSIASNSMIWIAILLVCLGFVWIWRSKNMEKKLPPGPRGLPILGSLHLLGANPHRDLHQLAQKYGPVMYLRLGFVPTIVVSSPQAAELFLKTHDVVFASRPPHEAAKHISWDQRNLSFAEYGSYWRNVRKMCILELLSQTKINSFRSMREEELDLLIKLVREAANDGAAVDLSAKVATLSADMSCRMVLGKKYKDRDIDEKGFKRVIQEGMHLTATPNMGDYIPYIAALDLQGLTRRMKVVAKIFDDFFEKIIDDHMQSDKGEDKTKDFVDVMLGFLGTQESEYRIERPNIKAILLDMLAGSMDTSATAIEWTLSELLKNPRVMKKVQMELESVVGRKRKVEESDLEKLEYLDMVIKESMRVHPVAPLLIPHQSTEECMVGEFLIPKESRVIVNAWTIMRDPSAWNEADKFWPERFEGRNIDLRGRDFELIPFGSGRRGCPGLQLGLTVIRLTVAQLVHCFDWKLPNDMLPHQLDMTEEFGLTMPRANHLHAIPTYRLSNQTNYPT 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01784 519 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 Gene3D Cytochrome P450 36 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 CDD CYP71-like 76 503 - -
Pste3g01784 519 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 PANTHER CYTOCHROME P450 93A3-LIKE 22 512 - -
Pste3g01784 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Pste3g01784 519 SUPERFAMILY Cytochrome P450 47 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g01784 519 FunFam Cytochrome P450 83B1 34 506 - -
Pste3g01784 519 Pfam Cytochrome P450 47 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01784 Pste-Chr3 11521522 11523165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01784 22 508 Cytochrome P450 AT3G26300 38.878 6.04e-129 383