Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01752 TTACTGAGCAATGCAGATTCCTGAACTTGAATTCATTTGCACATTGAACCAAAATTAGGGTTTGTGTGCCAGCAAGAAGAAGCAACAATGGCGCAGAAGCAGAGAACTCGTAAAGTAAGCAGAAACCCAGAATTGATAAGGGGAATTGGAAAGTACTCTAGGTCGCAGATGTACCACAAAAGGGGCATTTGGGCTATCAAGGCTAAAAACGGTGGCGTTTTCCCTCGCCACGACCCTAAACCCAAACCTGAATCTCCCGCAGAGAAAACTCCCAAATTTTATCCTGCCGATGATGTCAAGAAACCCCTTCTCAACAAGCACAAACCCAAACCCACTAAGCTCAGGGCTAGCATTACCCCGGGGACAGTGTTGATTCTTCTTGCCGGTAGATTTAAGGGAAAGAGGGTAGTCTTTTTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTTACTGGTCCTTTCAAGATTAATGGAGTTCCTTTGAGACGTGTGAATCAGTCCTATGTTATTGCCACATCAACCAATGTAGATGTCTCTGCTGTTAACGTCGACAGCTTTGACGACAAATACTTTACAAAGGAAATCCAAAAGCAGAAGAAGGGAGAAGGCGAGTTCTTTGAGGCAGAGAAGGAGGAAAAGAGTACGTTGCCACAGCAGAAGAAAGATGACCAGAAAACTGTGGACTCTGCATTGGTAAAAGCCATTGAGAGTGTTCCAGACCTGAAGGCTTACCTTGGTGCTAGGTTTTCTCTGAAGGCTGGTGTGAAACCTCATGAGCTAGTTTTCTAGAGGAAAGAGGGGTGTTATTCTTGTTTTTCATAGCCTTGTTGGTTCTTATAGTTTGCACTCATGTAACTTTCTTGTTAACAGACAAATGAAGAACGTAAAATTTTGTTAGGCAACCGATTGCGATACGTGCTCTTTAAGGTTTTGTTGATTGT 938 0.4339 MAQKQRTRKVSRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVFPRHDPKPKPESPAEKTPKFYPADDVKKPLLNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTNVDVSAVNVDSFDDKYFTKEIQKQKKGEGEFFEAEKEEKSTLPQQKKDDQKTVDSALVKAIESVPDLKAYLGARFSLKAGVKPHELVF 232
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01752 232 Gene3D - 87 171 IPR014722 -
Pste3g01752 232 Pfam Ribosomal protein L6, N-terminal domain 3 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Pste3g01752 232 Pfam Ribosomal protein L6e 126 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Pste3g01752 232 PANTHER 60S RIBOSOMAL PROTEIN L6 2 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Pste3g01752 232 FunFam 60S ribosomal protein L6 87 171 - -
Pste3g01752 232 MobiDBLite consensus disorder prediction 44 76 - -
Pste3g01752 232 CDD KOW_RPL6 81 232 IPR041997 -
Pste3g01752 232 SUPERFAMILY Translation proteins SH3-like domain 87 176 IPR008991 -
Pste3g01752 232 MobiDBLite consensus disorder prediction 41 85 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste3g01752 Pste-Chr3 11323505 11325223 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01752 1 232 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 78.541 3.60e-119 337