Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01737 TGTTGCAAACAATCTAGTGCTCAATTCTCTCAAGAGAGGAGTGTTTGAACTGACCTTAGAGATGGGCCACCGTTGCTGCAGCAAGCAGAAGATCAAAAGGGGGTTATGGTCTCCTGAAGAAGATGAGAAACTTGTCAAATACATCAACAAACATGGACATAAAAGTTGGAGTGCTGTCCCAAAATTTGCAGGCATATTGCATTTCTTTTTCTCTTTGTGTATCTGTGTTTGTGTGTTATATAAAAGGGCAAATGTTACAGACATTCTATGTGATCATTGGTTGCAAAGATGTGGGAAGAGTTGCAGGTTGAGATGGATTAATTATTTGAGGCCAGATCTGAAGAGGGGTTCCTTCACTGCTGAAGAGGAGCAGATCATAATTGACATTCATAGAATTCTTGGAAACAGATGGGCACAAATAGCAAAGCACCTACCAGGAAGAACAGACAATGAGGTCAAGAATTTCTGGAACTCTTGCATAAAAAAGAAGCTCATTTCACAAGGGTTAGATCCACAAACTCACACTCTTCTCTCTTCTCATAGGAGAAGCTCTGCATGTACCATCTCCAATATCCATCAAAATTCCAATTCAATTTTCATAATCAGTTCACATATTCCAAATGTTAATGCACCCTTGGAGACTACTAGTCAACTCTTTTCTTCGTTACCTAAACCTCCACCAAACATTGTTCAAACTCCCTCTAGCATTGCTACCACTGAATATGAAAGACCAACTATTCTTTCAGATAAATTCTCATCAGATTTTCCTTATGAACTATTATTGGAGAACACCACCAACATTTGTTCACCTTCATACATGGACCCAACAGCAGTTGAATTGGCTAACAATGAGAAGTGTGTGAATTGGGTTTCAAGAGCTAATGTTGATGATTTCAGTGCTCAAACATTGGATGAGGGAACACAAATGCCGTTGCAGCAAGAGAAGGATAAGACTTGTGAGAATAAGGGAATTGATGTGAAAGAAGCTTATAAGGCAAATCTTGAAACCAGTGCTTCTTTTGAGAGTTCTAACTTTGATTTTGGGTTGTTGGAGAGTGTGCTTACCTCAGAATTCATCTCTCATGATCTTCATTGTATGGAAGAACTTGCATGGAACTTT 1120 0.3902 MGHRCCSKQKIKRGLWSPEEDEKLVKYINKHGHKSWSAVPKFAGILHFFFSLCICVCVLYKRANVTDILCDHWLQRCGKSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDPQTHTLLSSHRRSSACTISNIHQNSNSIFIISSHIPNVNAPLETTSQLFSSLPKPPPNIVQTPSSIATTEYERPTILSDKFSSDFPYELLLENTTNICSPSYMDPTAVELANNEKCVNWVSRANVDDFSAQTLDEGTQMPLQQEKDKTCENKGIDVKEAYKANLETSASFESSNFDFGLLESVLTSEFISHDLHCMEELAWNF 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01737 353 CDD SANT 97 137 IPR001005 -
Pste3g01737 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 144 IPR017930 -
Pste3g01737 353 Gene3D - 10 95 - -
Pste3g01737 353 SMART sant 94 142 IPR001005 -
Pste3g01737 353 SMART sant 12 91 IPR001005 -
Pste3g01737 353 Gene3D - 97 167 - -
Pste3g01737 353 FunFam Transcription factor MYB86 96 170 - -
Pste3g01737 353 CDD SANT 16 89 IPR001005 -
Pste3g01737 353 PANTHER MYB DOMAIN PROTEIN 55 1 282 - -
Pste3g01737 353 SUPERFAMILY Homeodomain-like 71 147 IPR009057 -
Pste3g01737 353 SUPERFAMILY Homeodomain-like 7 42 IPR009057 -
Pste3g01737 353 ProSiteProfiles Myb-like domain profile. 90 140 IPR001005 -
Pste3g01737 353 ProSiteProfiles Myb-like domain profile. 8 89 IPR001005 -
Pste3g01737 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 44 IPR017930 -
Pste3g01737 353 Pfam Myb-like DNA-binding domain 13 89 IPR001005 -
Pste3g01737 353 Pfam Myb-like DNA-binding domain 95 138 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01737 Pste-Chr3 11162581 11164710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01737 1 162 MYB Transcription Factor Family AT3G12720 69.136 2.02e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste3g01737 Myb_DNA-binding 2.4e-11 CL0123