Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01723 ATTTTAACTCTGACCAAACCTCTTCCTGTAGAAACATCACCAAACTCTATATAGAGATTATACGAAGGGTGTAACGGAAGAGAGAAGGAGAAAGAGAAAACGATCATAAGAAGTGATGTCAACAACTTCCCATTCAATTGTTCATCACAGCTTGTTCGAGGAGCAGGATCAGATGCCTACACAGATGGGTAGCTTTTTTCCCTTTCCAACAAACCTTACTTTCCCTCCTTTGGGTTGCCATCAATCCTCTTTGAAAGGCTTCAGCTCCATAGGATCCTCTTCAGTTGCTATATCTCAAGAAGATTCTACATCAAATCTAACAGAAACCCTATTCTCAACCACTGCTCAAAAGTCAAGAGAAGACCTCACTTCTAGCTTGGGTGGAGCTCAATTCCTATCCTTACATAGATCAAGTGTAAATCCATGGGCACCTGGAGAAGTGACTGATTGCTTCAGCAGTAAAAGGAGTGGATTTGATGATCACCATCTCGGAATTTCAGCAATGAAGATGAAGAAAATCAAGGCAAGAAGGAAGGTAAGGGAACCTAGGTTTTGCTTCAAGACCATGAGCGATGTGGATGTATTGGACGATGGCTACAAGTGGAGGAAGTATGGACAGAAAGTTGTGAAGAACACACAGAACCCAAGGTATATTCATTCATGAATTCAAAGCTCCTCTTTTTTTGGTTTTGCTTTAATTTAAAAGTTG 709 0.4076 MSTTSHSIVHHSLFEEQDQMPTQMGSFFPFPTNLTFPPLGCHQSSLKGFSSIGSSSVAISQEDSTSNLTETLFSTTAQKSREDLTSSLGGAQFLSLHRSSVNPWAPGEVTDCFSSKRSGFDDHHLGISAMKMKKIKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQNPRYIHS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01723 182 Gene3D WRKY domain 144 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g01723 182 SMART WRKY_cls 157 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g01723 182 SUPERFAMILY WRKY DNA-binding domain 149 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g01723 182 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 178 IPR044810 GO:0003700
Pste3g01723 182 Pfam WRKY DNA -binding domain 158 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g01723 182 ProSiteProfiles WRKY domain profile. 152 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01723 Pste-Chr3 11012360 11013248 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01723 127 178 WRKY Transcription Factor Family AT4G39410 82.692 2.04e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste3g01723 WRKY 1.2e-06 CL0274