Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01694 ATGGGATGTGTTAACAGCAAAGACAGTCCTCCACGGAGCCGGAATCGAAAGCGCAATGGTGAAAGGTTGAAACGAAACAAGGACCATGCACCCACCCACAATAACAAGGAAAGAAACAAGATAGAAAGAGATAGTAGTAAGGTAAAGGGTGTTGCTAGAAATGAAGACAAGAGTCTTGAGGTTGGTAATGTTTCAGAGGAGAATAAGAATATTGCACGCTATGAGTTTGTAGATGGGTGGCCAAAATGGCTCGTTGATAATATCCCACAAAATGTTTTGGCTAGTTTGGTTCCTAAGACTGCTGATTCCTATGAAAAACTTGGAAAGGTGGGGCGTGGAACATATAGCAACGTATACAAAGGGCGAGATAAGGAAAGTGGAAAGATTGTTGCTTTGAAGAAGGTAAGGTTTGACACATCGGATCCTGAAAGCATAAAGTTTATGGCAAGAGAGATCATGATACTGCAGACGCTGGATCATCCCAATGTCATGAAACTGGAAGGGCTAGCAACTTCAAGGATGCAGTACAGTCTTTATCTTGTTTTTGATTACATGCACTCCGACCTTACCACAATTATCTCCCGCCCTGGGGACAAACTCACTCAACCACAGATCAAGTGTTATATGCAGCAGCTGCTTTTGGGGCTGCAGCATTGTCATGAGAGGGGAGTTATGCATAGAGATATTAAACCTTCTAACTTGTTAGTAGACAAAAAAGGGGTGCTAAAAATAGCAGATTTTGGGCTGGCAAATTCTTTTGCTATCAAACCTGAAGGGCCTTTTACAAATAGAGTGGTGACACTTTGGTATAGAGCTCCTGAACTTCTTTTAGGTTCCACAGATTATGGATATGAAATTGATCTCTGGAGTGCAGGATGCTTGTTGGCCGAGATGTTTCTTGGAAGACCAATTATGGCTGGGAGGACAGAGGTTGAACAGCTTCACATGATCTTCAAACTTTGTGGTTCACCTTCAGCAGATTACTGGATGAAAATGAAGCTAATGACAAGCTTCCGTCCGCCACAACAATATAAAGCTAATTATGAAGAAATCTTTAAGGAATTCCCTTCCTCTGCATGTGCACTCTTGACCACACTTCTTGATCTCGAATCTTATTCTCGTGGCACAGCTGCCTCTGCTCTTGAAAGTGAATTCTTCACATCAAGTCCATTAGCATGTGACCTTTCAGCGTTACCAGTGATCTATAAAGACGAGGAGGAAGGGTCACAAATAAAGAGACGCAAAAGGCACAAAAGTCTTAAAAATAAAGTACAAGTATTTCAAGCAAATGCATGTAATGTCAATGTGAGCCAGCCACGACAGAACCAAACCACTGAACAAAGTAGGAAAGATTCAGAATCATCAAAGGAGGAGAAGATGAAAGGTGAAGAAGAAACAAGGAAAAGTGGAAGCAGCGCATGCATGGCTATATCACCAGTTATAGTGAGAAAATCTCCCAAAACAGAGGGCCATCCAAATGCTCTTAAGAATATAAAAAACTATACCCTCTTACAAGCCTCTATAATTGATCTCATCAATCGCAATGAAGGCAACCAAATGCGCAAGTCCTTTTCTGCGTTCGATTTTCGGCTTCATCAATCCCTCTACGGAACAAATAACAAGTTGCCCCACAACATCTGA 1641 0.4174 MGCVNSKDSPPRSRNRKRNGERLKRNKDHAPTHNNKERNKIERDSSKVKGVARNEDKSLEVGNVSEENKNIARYEFVDGWPKWLVDNIPQNVLASLVPKTADSYEKLGKVGRGTYSNVYKGRDKESGKIVALKKVRFDTSDPESIKFMAREIMILQTLDHPNVMKLEGLATSRMQYSLYLVFDYMHSDLTTIISRPGDKLTQPQIKCYMQQLLLGLQHCHERGVMHRDIKPSNLLVDKKGVLKIADFGLANSFAIKPEGPFTNRVVTLWYRAPELLLGSTDYGYEIDLWSAGCLLAEMFLGRPIMAGRTEVEQLHMIFKLCGSPSADYWMKMKLMTSFRPPQQYKANYEEIFKEFPSSACALLTTLLDLESYSRGTAASALESEFFTSSPLACDLSALPVIYKDEEEGSQIKRRKRHKSLKNKVQVFQANACNVNVSQPRQNQTTEQSRKDSESSKEEKMKGEEETRKSGSSACMAISPVIVRKSPKTEGHPNALKNIKNYTLLQASIIDLINRNEGNQMRKSFSAFDFRLHQSLYGTNNKLPHNI 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01694 546 FunFam Putative serine/threonine-protein kinase 187 458 - -
Pste3g01694 546 ProSiteProfiles Protein kinase domain profile. 104 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01694 546 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Pste3g01694 546 Gene3D Transferase(Phosphotransferase) domain 1 187 428 - -
Pste3g01694 546 MobiDBLite consensus disorder prediction 1 61 - -
Pste3g01694 546 MobiDBLite consensus disorder prediction 24 61 - -
Pste3g01694 546 MobiDBLite consensus disorder prediction 446 468 - -
Pste3g01694 546 SUPERFAMILY Protein kinase-like (PK-like) 99 391 IPR011009 -
Pste3g01694 546 Gene3D Phosphorylase Kinase; domain 1 93 186 - -
Pste3g01694 546 Pfam Protein kinase domain 104 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01694 546 PANTHER CELL DIVISION PROTEIN KINASE 102 391 - -
Pste3g01694 546 SMART serkin_6 104 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01694 546 CDD STKc_CDK9_like 104 386 - -
Pste3g01694 546 MobiDBLite consensus disorder prediction 435 472 - -
Pste3g01694 546 FunFam probable serine/threonine-protein kinase At1g54610 91 186 - -
Pste3g01694 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01694 Pste-Chr3 10769622 10773152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01694 99 419 Core Cell Cycle Gene Families AT5G10270 44.248 8.03e-94 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste3g01694 Pkinase 6.4e-67 CL0016