Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01691 ATGCCAGCTTTGATTTCATCTAGGCTTCTTTTACTTGTTGGAGAGTCGCTCTTCATGAGAAGGGCTTTGGCCACTTCTGGGTCTGTTTTATTGCACACTAGTGTTAGATGTATGAGCCAGGTGGAACCCCATCAGGGTTCACTCTCCCTTTCTAGCATTGGTTTACAAACAGAAATTGAAGATAGAAAAAGAAGCAAAATAAATAAGGTTAAGCCATTGGGTTCACCCTCTGAGAGTCTCAAGAGCAAAGGAAAGTCTTTTGACATTAATGAAAAGAAGAAGAAAGCTTTTAGGGTTGTAGAGAAACAACAGCAAATAGAGTCTGCCCCTTTTGCTGCAAAGTCATTTTCTGAACTTGGCCTCCCACATGTGTTGATTGAGAGGCTAGAGAAGGAGGGTTTCACGGTTCCCACAGAAGTTCAGTCTGCTGCAGTTCCCACCGTTCTGAACAACCGTGATGTCATAATTCAGTCTTACACAGGTTCAGGCAAGACATTGGCTTATCTGCTTCCTATACTCTCAGTTGTTGGGCCACTGAGGGGCAAAATTCCTGAAGGTGGTGGTCATGGCAATGAGAGTGAGAAGAAGTTGGGAGTTGAAGCAGTGATTATTGCTCCTTCTAGGGAGCTTGGGATGCAAATAGTGAGGGAATTTGAGAAGGTTTTAGGAATGGATAACAAGAGAGTGGTTCAGCAGCTTGTGGGAGGTGCTAACCGAACTAGGCAGGAAGAAGCGCTCAAGAAAAATAAGCCTGCCATTGTTGTTGGCACACCTGGTAGGATAGCGGAGCTAAGTGCATCTGGGAAACTTCGCACTCATGGCTGTCGATATTTGGTATTAGATGAAGTTGATGAACTCTTGTCGTTCAATTTCCGGGAAGACATGCACCGGATATTGGAGCATGTAGGGAGGAGATCAGGTGCAGACCTAAACTCGAATTCTAGAAAGGCCGAGCGGCAGTTAATTATGGTTTCAGCAACTGTGCCATTTTCTGTTGTGAGGGCAGCTAGGAGCTGGGGTTGTGACCCTCTTCTTGTCCAAGCTAAGAAAGTTGTCACTCTTGAAACTGTCTCTCCCTCCGAGCCTGTCAGTTTGTCTCGGTCTACGCCCAGCTCTGCTATGCCATCTCAGGCAGTAGTAGAGAGTCTACCTCCAGCATTGAAACACTATTACTGTGTAACAAGGTTGCAGCACAAAGTTGATATGTTGAGAAAGTGTATTCATGCACTGGATGCCAAATTTGTGATAGCTTTCATGAACCACACTAAGCAGCTAAAGGATGTTGTTTTCAAACTGGAAGCCCGTGGGATGAAAGCTGTTGAGTTACATGGGGATCTTGGGAAGCTTGCAAGGTCAACAACTCTGAAGAAATTCAAGAATGGTGAGGTGAGAGTTCTGGTGACAAATGAATTGTCAGCAAGGGGTTTGGATATAGCAGAATGTGATCTTGTGGTTAATCTAGACTTACCGACAGATTCAATTCACTATGCACACCGAGCTGGCCGAACTGGTCGACTTGGTAGGAATGGTACAGTTCTAACTATATGTGAAGAGTCAGAAGTTTTTGTAGTGAAGAAAATGCAGAAGCAGCTGGGAATACCAATTGCATCCTGTGATTTTACAGAGGGGAAGTTACTTGTCACTGAAGAAGAAAAAACAGTAAGCACTTCTGAAAGATGA 1680 0.4446 MPALISSRLLLLVGESLFMRRALATSGSVLLHTSVRCMSQVEPHQGSLSLSSIGLQTEIEDRKRSKINKVKPLGSPSESLKSKGKSFDINEKKKKAFRVVEKQQQIESAPFAAKSFSELGLPHVLIERLEKEGFTVPTEVQSAAVPTVLNNRDVIIQSYTGSGKTLAYLLPILSVVGPLRGKIPEGGGHGNESEKKLGVEAVIIAPSRELGMQIVREFEKVLGMDNKRVVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSASGKLRTHGCRYLVLDEVDELLSFNFREDMHRILEHVGRRSGADLNSNSRKAERQLIMVSATVPFSVVRAARSWGCDPLLVQAKKVVTLETVSPSEPVSLSRSTPSSAMPSQAVVESLPPALKHYYCVTRLQHKVDMLRKCIHALDAKFVIAFMNHTKQLKDVVFKLEARGMKAVELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDIAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTICEESEVFVVKKMQKQLGIPIASCDFTEGKLLVTEEEKTVSTSER 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01691 559 SMART helicmild6 426 507 IPR001650 -
Pste3g01691 559 CDD SF2_C_DEAD 387 516 - -
Pste3g01691 559 Gene3D - 79 348 IPR027417 -
Pste3g01691 559 Pfam DEAD/DEAH box helicase 138 332 IPR011545 GO:0003676|GO:0005524
Pste3g01691 559 Pfam Helicase conserved C-terminal domain 401 507 IPR001650 -
Pste3g01691 559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 527 IPR027417 -
Pste3g01691 559 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 402 546 IPR001650 -
Pste3g01691 559 SMART ultradead3 133 366 IPR014001 -
Pste3g01691 559 CDD DEADc 125 347 - -
Pste3g01691 559 Gene3D - 384 548 IPR027417 -
Pste3g01691 559 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 145 346 IPR014001 -
Pste3g01691 559 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 26 547 - -
Pste3g01691 559 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 114 142 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01691 Pste-Chr3 10732109 10733788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01691 115 535 Eukaryotic Initiation Factors Gene Family AT3G19760 24.408 1.08e-42 155