Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01684 CACCGACAAGCGCCAAGTTGTTTGTCTCCACAAAAACGCAACCTAGTTTCCAGATTTCACACCTAAATCTTTTGACCCATCAACCTGATGGCTTGGCCATGCACATGGAATTATTATTACTACTGCTGCATCTATTTCAGATATCTTGTCTTATTTTAAAGTTTAAACACTTGATGGCGGCTATAACCAACTTTTCCTAGCTTCATATGAACAAGTTTGGTTAATGCGTGGGTGCATGCAAAAAGTAAAGAGGTGAAGTTGAAGTTATGGCGAAGCATAGAGAAAAGAGTAACGAGGTTGAGCAGAGCGAGGAGAGAGCCAGACAGCATCAGTCCTTGTCAATGCCGATCATGTTTTCTGGTTTGAACAGAGAGAGAGAGATGTCAGCCATGATCTCCGCTTTGACCCATGTCATCCGTGGAGAGGAGGAGCACCACCACCACCACCACCACCACCACCACCACCACCACCATACGGTTCCTGTTGAAGCTTCATCAACTTCAACTTCAACATCAACATCAACTTCTACTATGCCTGCCACCTCTGTTCTCAAGAGAAGAAGGGAACATCATAATACAAATACACCATCCTTATCCTTTCCTCATATCTCACCTGCTATTTCTATTTCAACAGTTGCGGAAACGAGGGAAATGGAGAATATGGTATACGATTACGAATGCAGAACAGAGAAGGTGAGAGTGGAAGAGGAACAGAGGAGGAAGTACAGGGGAGTGAGACAGAGGCCATGGGGGAAATGGGCTGCGGAAATAAGAGACCCCTTCAAGGCAACCAGAGTGTGGTTAGGAACATACGAGACAGCTGAGGACGCAGCCAGAGCGTACGATCAAGCTTCGTTGCGTTTCAGAGGCAGCAAAGCCAAACTCAACTTCCCTGAAAATGTGAGGCTCAGACAAGCTCAAGCTCAAGCTCAAGCTCAAGCTCCATTGAATCCACCCACCCCTTCGCCCATTCACCACTTTCCCCTCTCTCTCTATCATCACATTGCTACGTCTTCTCATCTTCAATCTTCACCCTCCACCTCCTATTCTTCTTCTTCTTCTTCAACTCACCCACCTTCCATTTATCCACCACCCTGGTCTTCTGGTTATACCTCTCCCTCAGACTGATATCAACTCTCTTTCTTTCTCCCTTCTATTATGTTTATTCTCCACTCCACTCTGGTTTCTTTTTTCTTTTGTCACAATGGTTCTCATTACGCATCAAATGTTTGTACCTATCCTACAAATATTTATTCTCCAAAAGTTTAGTAAAATTTATTTTGATAGAAACTATTCCA 1297 0.4426 MAKHREKSNEVEQSEERARQHQSLSMPIMFSGLNREREMSAMISALTHVIRGEEEHHHHHHHHHHHHHHTVPVEASSTSTSTSTSTSTMPATSVLKRRREHHNTNTPSLSFPHISPAISISTVAETREMENMVYDYECRTEKVRVEEEQRRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTYETAEDAARAYDQASLRFRGSKAKLNFPENVRLRQAQAQAQAQAPLNPPTPSPIHHFPLSLYHHIATSSHLQSSPSTSYSSSSSSTHPPSIYPPPWSSGYTSPSD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01684 286 MobiDBLite consensus disorder prediction 55 70 - -
Pste3g01684 286 CDD AP2 152 211 IPR001471 GO:0003700|GO:0006355
Pste3g01684 286 MobiDBLite consensus disorder prediction 54 110 - -
Pste3g01684 286 PANTHER DNA-BINDING DOMAIN 84 260 IPR044808 GO:0003700|GO:0009873
Pste3g01684 286 FunFam Ethylene-responsive transcription factor 2 151 210 - -
Pste3g01684 286 ProSiteProfiles AP2/ERF domain profile. 152 209 IPR001471 GO:0003700|GO:0006355
Pste3g01684 286 Coils Coil 4 24 - -
Pste3g01684 286 MobiDBLite consensus disorder prediction 1 19 - -
Pste3g01684 286 SUPERFAMILY DNA-binding domain 152 210 IPR016177 GO:0003677
Pste3g01684 286 Gene3D AP2/ERF domain 151 211 IPR036955 GO:0003700|GO:0006355
Pste3g01684 286 MobiDBLite consensus disorder prediction 252 268 - -
Pste3g01684 286 MobiDBLite consensus disorder prediction 1 26 - -
Pste3g01684 286 MobiDBLite consensus disorder prediction 73 93 - -
Pste3g01684 286 Pfam AP2 domain 152 201 IPR001471 GO:0003700|GO:0006355
Pste3g01684 286 SMART rav1_2 152 215 IPR001471 GO:0003700|GO:0006355
Pste3g01684 286 MobiDBLite consensus disorder prediction 252 286 - -
Pste3g01684 286 PRINTS Ethylene responsive element binding protein signature 153 164 IPR001471 GO:0003700|GO:0006355
Pste3g01684 286 PRINTS Ethylene responsive element binding protein signature 175 191 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01684 Pste-Chr3 10692509 10693981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01684 150 214 AP2-EREBP Transcription Factor Family AT5G61890 81.538 3.01e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste3g01684 AP2 2.8e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01684 3 10692509 10693981 Pste3g01684 3 10692509 10693981 ECH
Pste3g01684 3 10692509 10693981 Pste2g03671 2 39947176 39948933 ECH