Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01678 CAGCATTCTTTAAGATACAACACATTAGTTACCACCCTTTTATTGCACCTACCAACAACTCTCTCATTAATAAACATTCATTCATCTTGGTCTAGCTAGTTCCACAGGCAACCATTCTGAGTTTCATGATCAGAAGAGTCTAGCATCATGGGAACACCTGTGAACATAATCGTTGGATCACAGGTTTGGGTTGAGGATCCTGAGGTTGCATGGATTGATGGTGAGGTGACAGAAATCAAAGGCAAAAATGCCACCATCATTGCCACAAATGGGAAAACTGTTGTGGCAGAAATTTCAAGCATATACCCCAAAGATACAGAGGCACCACCTGCAGGAGTTGATGACATGACAAAGCTAGCATACCTTCATGAACCAGGAGTCCTGCATAACCTTGCTACTCGTTTTTCCCTCAATGAGATATATACATATACAGGGAATATTTTAATTGCAGTGAATCCTTTTCGAAGACTGCCACATTTGTATGACATCCATATGATGGAGCAGTACAAAGGAGCAGCATTTGGAGAGCTAAGTCCTCATCTTTTTGCTGTAGCTGACACATGTTACAGGGCAATGATAAATGAAAATGGAAGTCAATCCATTTTGGTAAGTGGAGAGAGTGGAGCTGGTAAAACTGAGACAACGAAAATGCTCATGAGATATCTAGCATTCATGGGGGGTAGATCTGCTACAGAAGGAAGAACTGTAGAACAACAGGTTTTGGAGTGTTGGAAGCATTTGGAAATGCCAAAACTGTCAAAAACAACAACTCAAGGCAAGTTGCATAGATATTTTCTCAGTTTCTATAACAGTTCCTATTTTAGTTTATCTTACAAAATAATTGGAGTTTGTGGCAGTCGTTTTGGTAAATTTGTTGAAATTCAATTTGACAAGAATGGGAAGATTTCTGGAGCTGCAATCCGAACATATCTCCTCGAAAGATCACGAGTTTGCCAGGTCTCTGATCCGGAGAGAAACTATCACTGCTTTTACATGCTTTGTTCAGCACCACCAGAGGATGTCAAAAGATACAAGTTAGGGGATCCGAAGCAATTCCACTATCTTAATCAATCAAACTGTTATCAAGTGTCAAATGTAGATGATGCAAAAGAATACTTGGAAACCAGAAATGCAATGGACATTGTTGGCATTAGCCAAGATGAGCAGGATGCTATCTTTCGTGTGGTAGCTGCAATCCTCCATCTTGGAAACATTGACTTTGTCAAAGGGAAAGAAGTTGATTCTTCCAAATTGAAAGATGACAAATCACTTTTCCACCTTCGGACAGCTGCAGAGTTATTCATGTGTGATGAGAAAGCACTAGAACACTCACTTTGCCAGCGTGTCATTGTAACGCCTGATGGTAACATTACCAAACCTCTAGACCCAGATGCAGCTGCTTTGAGCCGAGATGCCTTGTCAAAGACAGTGTACTCGAGATTGATTGTTGACAAGATTAACAGTTCAATTGGTCAGGATTCCAATGCAGTAAGCATTATAGGAGTCCTTGACATTTATGGGTTTGAAAGCTTCAAAATCAACAGTTTTGAGCAACTATGCATCAACCTAACGAATGAGAAGTTGCAACAACATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAAGAGTACACGAAAGAAGAAATCAATTGGAGCTATGTAGAATTTGTGGATAATCAGGATGTTCTTGATCTTATTGAGAAGAAACCAGGAGGCATAATCGCTCTTCTTGATGAAGCCTGCATGTTCCCAAAATCGACTCATGAGACTTTTGCACAAAAGATGTACCAGACGTACAAAGCACACAAGCGCTTCAGCAAGCCAAAACTTGCTCGAACTGATTTCACGATTAACCACTATGCTGGAGATGTCACATATCAAGCAGATTATTTTCTTGATAAAAACAAAGATTATGTTGTAGCAGAGCATCAAGCTCTCTTATGTGCTTCCAAGTGTCCATTTGTTGCTAATCTTTTCCCTCCTTTACCAGAGGAGACATCAAAGCAATCAAAATTCTCTTCCATTGGTTCACAGTTTAAGCAACAACTGCAATCTCTCATGGAGACACTGAACACAACAGAACCACATTACATCAGATGTGTGAAACCAAACACAGTTTTGCAGCCAGGAATCTTTGAGAACTTCAATGTCTTAAACCAGTTAAGATGTGGGTTGTGCTGGATATCCAACAAAAGAACTTTTGAAGAGTTTCTTGACCGCTTTGGAATGCTAGCCCCTGATGTCCTTGACGGCTCTGATGAGAAAAAGGCATCTATGGCCATCTGTGATAAGATGGGCTTAAAAGGCTATCAAATGGGGAAAACAAAGGTATTTCTCAGAGCAGGTCAGATGGCTGAATTAGATGCACGAAGAGCCGAAGTCTTAGCTAAAGCGGCTAAACTCATACAGAGACAAATCCGAACGCATTTAACAAGAAAGGAGTTCATCACCCTGAGAAAGGCCACAATTCATATCCAGAAGATTTGGAGAGCTAAACTTGCACGTAAACTCTATGAACATATGAGGAGGGAAGCAGCTTCTATCAGGATACAGAAACATGTGCGTGCACACAGAGCAAGAATGTATTACACAACGTTACAAGCATCAGCTATAGTTATTCAATCAGGGTTGAGAGCATTATCAGCACGAAATGAATTTAGGTACAGAAGAAGAACAAAGGCTTCGACTAAAATCCAGACACAATGGAGAAGAGCCCAAGCTCTTTCTGATTACAAACAGCAGAAGAAAGCAACTGTTGCACTTCAATGTCTATGGAGAGCTAGAGTTGCAAGGAAAGAGCTCAGAAAGCTTCGGATGGCTGCAAGGGAAACTGGAGCACTTAAAGAAGCAAAGGACAAGTTGGAGAAGCGTGTCGAGGAGCTTACATGGAGACTAGATATTGAAAAGCACATGAGAATGGATCTTGAAGAAGCTAAAGGGCAAGAGATTGCAAAATTGCAAAATGCTTTACAAGAAATGCAAACTCAGCTAGATGAAGCCCATGCTGCAATTATACATGAGAGAGAAGCAGCAAAAATAGCAATTGAACAAGCACCACCAGTAATTAAAGAAGTACCTGTTGTCGACAATACCAAGCTAGAGTTACTAACAAATAAAAATGAGGAGTTGGAGACTGAAGTAGAAGAATTGAAAAAGAAGATTAAAGAGTTTGAAGAAAGGTGCTCAGAAATTGAAAACGAGAATCAAGAAAGGCTGAAAGAGGCAGAAGAAGCACAACTTAAAGCAACACAACTTCAAGAGACTATTGAAAGATTAGAATTGAGTCTGTCAAACCTTGAGTCTGAGAACCAGGTTCTATGCCAACAGGCTTTGGAAGAAGCAAAAAATGAAGAACTTTTAGATGAGATCAAAATCCTCAAGAGTCAGATAGAAAATCTAGAATCAGAGAATGAATCCCTACGGAGCCAGGCAGCAGCTGCTTTAGAGCAGAAAGTTCATCCAGAAATAATAGAGACAGACCATGAAGGTGCTGTTGTAGAGAAGACGCAACCAAGACATGAAGTTGCTGTTGTAGAGAATATGCAACCAAGAAATGAAGTTGCTGTTGCAGAGCAGATACAACCAAGAGTTATTTCAGATACTATGACTACACAAATAAAGAGTTTGGATAATGGAAATCAAACAGAGGAAGAATGGCAAGCAAGAAAAGAACCAAAAACACCAGTCCTCTTTCTTACAAAACAAAGATCACTCACAGACAGGCAGCAGGAGAGTCATGATGCACTGCTCAAGTGTCTCACCGAAGACAAGCGATTTGAGAAAAACAGACCAGCGGTTGCTTGTATTGTATATAAAGCACTTCTTCATTGGAGATCCCTTGAAGCAGAGAAAACACATATATTTGATAAAATTACACATGCTATCCGATCATCCATAGAGAGTCAAGAAGGAATCCATGATCTAGCCTACTGGCTTTCAACAACTTCGACACTTCTATTTTATCTACAGTGCACAATGAAGGCCAGCAATACAACTAAGGCAGTGTCACGTAACCGAAATTCCCCTGCCACTTTGTTTGGCAAAATGGCACAAGGTTTACGTTCATCTTCAATGGGATTGGGGATTTCAAGTGGCTACAGTGGAATGGTGGACAAGCCAAATGATCAATCTAAAATAGAAGCCAAGTATCCAGCTATTCTGTTTAAGCAGCATTTAACTGCATATGTTGAGAAGATATATGGAATGATTCGTGATAGTTTAAAGAAAGAGATTAGTCCATTCTTAAATTTGTGCATACAGGCCCCGAGAGCCATAAGGACTAGATCAATAAGAGGGTCATCCAGAAATATCCAATCAAATATTGTTGCAAAACAGCAGGCATTGCATATGCACTGGAAAGGCATTGTGGACAAGTTAGATACTGTTTTGCGTATATTGTCTGATAACTATGTCCCTCCCATCATAACAAGGAAGATATTTAGTCAGGTTTTCTCATTCATGAATGTCCAGCTCTTTAATAGTTTGTTGCTTCGTCGTGAATGTTGTTCCTTTAGCAATGGAGAATATTTGAAGGCAGGTTTGCATGAGTTGGAACTATGGTGTCTAAAAGCGACAGATCAGTTTGCTGGGTTTTCTTGGGATGAACTCAAACACATACGCCAAGCTGTTGGCTTTCTGGTTTTGCATCAAAAGACTCAAAAGTCTTTGGAGGAGATCACAAGTGAGCTCTGCCCGGTGTTAAGTATCCCACAAATATATCGCATTGGAACTATGTTCTGGGATGACAAGTATGGAGCACAGGGATTATCTGCAGAAGTCATTAGCAGAATGAGAAAGATTATGACAGAAGACTCAATTAGCATAAACCATAACTCATTCCTTCTAGAGGTGGACTCCAGCATACCATTCTTAATGGAGGAGATGTTCCGGTCCATGAGCGACATCCGCCTATCAGACATGGATGTGGATCCACCACCAATCCTCAGGCAAAGGTCTGACTTTCAATTCTTGCTGCAACAAATGGATAGTGACTCTCAGTGAGCTGCTGAAAGTTTGATGCTGATATTAGTTACAGATTTTGATTTGTATTGATTTATTTGGGTTTGGCGTGGAGAAACTAATTGAGTGGTGAGGTGAGGAATTGTAATTAGTTTATTTATTTTTTCTAATTATTTTCATTTGTTTTTGGGAAGATCCCAATTTTGTTTATTATTCTTGTAAGGCTTCTTGTAAAGGAAGGCCACACTGAATTTTGCCATTGTTGTATAATGTTACTTCAGAAATTAATGAAATGAAAGGAAGTTTG 5266 0.3988 MGTPVNIIVGSQVWVEDPEVAWIDGEVTEIKGKNATIIATNGKTVVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLATRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSATEGRTVEQQVLECWKHLEMPKLSKTTTQGKLHRYFLSFYNSSYFSLSYKIIGVCGSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCSAPPEDVKRYKLGDPKQFHYLNQSNCYQVSNVDDAKEYLETRNAMDIVGISQDEQDAIFRVVAAILHLGNIDFVKGKEVDSSKLKDDKSLFHLRTAAELFMCDEKALEHSLCQRVIVTPDGNITKPLDPDAAALSRDALSKTVYSRLIVDKINSSIGQDSNAVSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKLARTDFTINHYAGDVTYQADYFLDKNKDYVVAEHQALLCASKCPFVANLFPPLPEETSKQSKFSSIGSQFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGLCWISNKRTFEEFLDRFGMLAPDVLDGSDEKKASMAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEVLAKAAKLIQRQIRTHLTRKEFITLRKATIHIQKIWRAKLARKLYEHMRREAASIRIQKHVRAHRARMYYTTLQASAIVIQSGLRALSARNEFRYRRRTKASTKIQTQWRRAQALSDYKQQKKATVALQCLWRARVARKELRKLRMAARETGALKEAKDKLEKRVEELTWRLDIEKHMRMDLEEAKGQEIAKLQNALQEMQTQLDEAHAAIIHEREAAKIAIEQAPPVIKEVPVVDNTKLELLTNKNEELETEVEELKKKIKEFEERCSEIENENQERLKEAEEAQLKATQLQETIERLELSLSNLESENQVLCQQALEEAKNEELLDEIKILKSQIENLESENESLRSQAAAALEQKVHPEIIETDHEGAVVEKTQPRHEVAVVENMQPRNEVAVAEQIQPRVISDTMTTQIKSLDNGNQTEEEWQARKEPKTPVLFLTKQRSLTDRQQESHDALLKCLTEDKRFEKNRPAVACIVYKALLHWRSLEAEKTHIFDKITHAIRSSIESQEGIHDLAYWLSTTSTLLFYLQCTMKASNTTKAVSRNRNSPATLFGKMAQGLRSSSMGLGISSGYSGMVDKPNDQSKIEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRAIRTRSIRGSSRNIQSNIVAKQQALHMHWKGIVDKLDTVLRILSDNYVPPIITRKIFSQVFSFMNVQLFNSLLLRRECCSFSNGEYLKAGLHELELWCLKATDQFAGFSWDELKHIRQAVGFLVLHQKTQKSLEEITSELCPVLSIPQIYRIGTMFWDDKYGAQGLSAEVISRMRKIMTEDSISINHNSFLLEVDSSIPFLMEEMFRSMSDIRLSDMDVDPPPILRQRSDFQFLLQQMDSDSQ 1617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01678 1617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 797 IPR027417 -
Pste3g01678 1617 Coils Coil 888 954 - -
Pste3g01678 1617 Pfam IQ calmodulin-binding motif 748 766 IPR000048 GO:0005515
Pste3g01678 1617 Pfam IQ calmodulin-binding motif 770 789 IPR000048 GO:0005515
Pste3g01678 1617 Pfam IQ calmodulin-binding motif 867 886 IPR000048 GO:0005515
Pste3g01678 1617 Pfam IQ calmodulin-binding motif 796 814 IPR000048 GO:0005515
Pste3g01678 1617 CDD MyosinXI_CBD 1191 1577 IPR037975 GO:0007015
Pste3g01678 1617 SMART DIL_2 1429 1536 IPR002710 -
Pste3g01678 1617 Gene3D - 680 741 - -
Pste3g01678 1617 Gene3D Myosin VI head, motor domain, U50 subdomain 336 622 - -
Pste3g01678 1617 Gene3D Kinesin motor domain 237 674 IPR036961 -
Pste3g01678 1617 Gene3D - 844 893 - -
Pste3g01678 1617 Gene3D - 744 796 - -
Pste3g01678 1617 Gene3D - 797 843 - -
Pste3g01678 1617 FunFam unconventional myosin-Va 748 796 - -
Pste3g01678 1617 Gene3D Kinesin motor domain 57 223 IPR036961 -
Pste3g01678 1617 Pfam Myosin N-terminal SH3-like domain 10 47 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pste3g01678 1617 CDD MYSc_Myo11 76 731 IPR036018 -
Pste3g01678 1617 FunFam Class V myosin 460 599 - -
Pste3g01678 1617 FunFam Myosin heavy chain 276 331 - -
Pste3g01678 1617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 797 894 IPR027417 -
Pste3g01678 1617 FunFam unconventional myosin-Va 844 892 - -
Pste3g01678 1617 ProSiteProfiles IQ motif profile. 769 798 IPR000048 GO:0005515
Pste3g01678 1617 Gene3D - 276 334 - -
Pste3g01678 1617 Pfam Myosin head (motor domain) 64 199 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste3g01678 1617 Pfam Myosin head (motor domain) 237 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste3g01678 1617 SMART iq_5 864 886 IPR000048 GO:0005515
Pste3g01678 1617 SMART iq_5 793 815 IPR000048 GO:0005515
Pste3g01678 1617 SMART iq_5 768 790 IPR000048 GO:0005515
Pste3g01678 1617 SMART iq_5 816 838 IPR000048 GO:0005515
Pste3g01678 1617 SMART iq_5 841 863 IPR000048 GO:0005515
Pste3g01678 1617 SMART iq_5 745 767 IPR000048 GO:0005515
Pste3g01678 1617 Coils Coil 984 1101 - -
Pste3g01678 1617 ProSiteProfiles IQ motif profile. 842 871 IPR000048 GO:0005515
Pste3g01678 1617 Gene3D - 460 644 - -
Pste3g01678 1617 ProSiteProfiles Myosin motor domain profile. 62 743 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste3g01678 1617 ProSiteProfiles IQ motif profile. 746 773 IPR000048 GO:0005515
Pste3g01678 1617 ProSiteProfiles IQ motif profile. 817 846 IPR000048 GO:0005515
Pste3g01678 1617 PRINTS Myosin heavy chain signature 220 247 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste3g01678 1617 PRINTS Myosin heavy chain signature 503 531 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste3g01678 1617 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste3g01678 1617 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste3g01678 1617 PRINTS Myosin heavy chain signature 450 478 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste3g01678 1617 ProSiteProfiles IQ motif profile. 865 894 IPR000048 GO:0005515
Pste3g01678 1617 ProSiteProfiles IQ motif profile. 794 820 IPR000048 GO:0005515
Pste3g01678 1617 Coils Coil 735 755 - -
Pste3g01678 1617 Pfam DIL domain 1430 1533 IPR002710 -
Pste3g01678 1617 PANTHER MYOSIN 54 1542 - -
Pste3g01678 1617 SMART MYSc_2a 56 744 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste3g01678 1617 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pste3g01678 1617 ProSiteProfiles Dilute domain profile. 1240 1554 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01678 Pste-Chr3 10580765 10593706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01678 116 1612 Myosins gene family AT2G31900 69.093 0.0 2115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01678 3 10580765 10593706 Pste3g01678 3 10580765 10593706 ECH