Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01671 TATATAGAGAGAGTGTGCGTAGTAGACATTAGTTGGAAAAGGGCGAAGAGAGCAGAGTGAGGATCGAAGAGAGGAGGAAGGAAGACAAAGATGGCAAAAGATTCACAAATTGAGCTCCCTGTGAAGGCTTTTGGTTGGGCTGCTAGAGACACTTCAGGCACCCTTTCCCCCTTTCATTTTTCCAGAAGGGATAATGGTGACGATGACGTCACCCTCCGTATCCTCTTTTGCGGGGTTTGCCATTCTGATCTCCACACTATAAAAAACGATTGGGGTTTCACCACTTACCCTGTAGTTCCTGGGCATGAAATTGTTGGTATTGCGACAAAAATCGGTAAGAACGTGAAAAAATTCAAAGTGGGTGATAAAGTTGGAGTTGGTGTGATTGTGGAGTCTTGTAAGGAATGTGAGTATTGCAAACAGGATCTGGAGAGTTACTGTCCCCGCCTTGTGTATACCTATAACTCTCCTTATTATGATGGGACACGAACCCAAGGTGGATATTCTAACATGGTGGTTGTTAACCAGCGTTATGTGCTCCGGTTTCCTGAGAACTTACCCCTTGATGCTGGTGCTCCACTGCTGTGTGCTGGGATCACTGTCTATAGCCCAATGAAATATTATGGGATGACTGAGCCAGGCAAATGTTTGGGAGTGGCAGGGCTTGGTGGGTTAGGCCATGTGGCAGTCAAATTTGGTAAGGCGTTTGGGTTGAAAGTTACTGTCATTAGTACCTCTGCAAAGAAGCAATCTGAGGCCATTGAAAGACTTGGGGCTGATTCTTTCGTTGTTTCCTCCGACCCTGCACAAATGAAGGCAGCTATGGGAACCATGGACTATATCATAGACACAATTTCAGCTGTTCATTCCCTGGTTCCACTGCTTGGTCTGCTGAAGCTGAATGGGAAACTAGTTACTGTTGGGTTGCCTAACAAGCCCCTTGAGCTGCCTATTTTTCCATTGGTTGCAGGACGGAAGCTGATAGGGGGGAGTAACTTTGGAGGGCTCGAGGAAACTCAGGAAATGCTTGATTTCTGCGGAAAGCACAATATAGCTGCAGATATTGAGCTGATTAAGATGGATCAAATCAACACAGCCATTGAAAGGCTTAGCAAAGCTGATGTGAAATATCGCTTTGTGATTGATGTGGCTAACTCTCTCGCTAGTTAGTAGAAAACACCGTAATTCTCCTACTCTTTGCATGTGCGGCCTTAGATATCTCAGTGTTTTGGGAATAGTTAAGATATGTGATACAAGTCTATTAGTTGTTGAACTTTTAAGATAAGGACATAGTCTCTTAAACTAATAATTAATACTTTGGGCCTTGAATTTACATCTTGTTACTCCCTCTTCATGAATTTGACTAAAGATTTGTTTGGATAA 1383 0.4367 MAKDSQIELPVKAFGWAARDTSGTLSPFHFSRRDNGDDDVTLRILFCGVCHSDLHTIKNDWGFTTYPVVPGHEIVGIATKIGKNVKKFKVGDKVGVGVIVESCKECEYCKQDLESYCPRLVYTYNSPYYDGTRTQGGYSNMVVVNQRYVLRFPENLPLDAGAPLLCAGITVYSPMKYYGMTEPGKCLGVAGLGGLGHVAVKFGKAFGLKVTVISTSAKKQSEAIERLGADSFVVSSDPAQMKAAMGTMDYIIDTISAVHSLVPLLGLLKLNGKLVTVGLPNKPLELPIFPLVAGRKLIGGSNFGGLEETQEMLDFCGKHNIAADIELIKMDQINTAIERLSKADVKYRFVIDVANSLAS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01671 359 Gene3D - 16 353 - -
Pste3g01671 359 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Pste3g01671 359 SUPERFAMILY GroES-like 20 185 IPR011032 -
Pste3g01671 359 CDD CAD1 14 352 IPR047109 GO:0016616
Pste3g01671 359 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Pste3g01671 359 FunFam probable cinnamyl alcohol dehydrogenase 16 175 - -
Pste3g01671 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Pste3g01671 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Pste3g01671 359 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Pste3g01671 359 PANTHER ALDEHYDE REDUCTASE 7 356 IPR047109 GO:0016616
Pste3g01671 359 Gene3D - 167 323 - -
Pste3g01671 359 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Pste3g01671 359 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01671 Pste-Chr3 10550889 10554251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01671 12 357 Monolignol Biosynthesis Gene Families AT2G21730 71.839 0.0 521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01671 3 10550889 10554251 Pste3g01671 3 10550889 10554251 ECH