Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01669 ATAAATTCATCAATTTCGATGTTCATGATTAGTTTCAGTAACAGACGTTTCGGCTCAGGTGTTTTATAATTTCATTGCCATTGAGTTTCCCTCATTTAAAAAATAAAAATAGACATTGGTTTTATTTGTTTGTGTGGTGGATTCGTGTTCTCAAATCATAAGATGGATTTAGAGGATTTCCGATCCATATTGGAGAGTGCAGGAGTCGATGTTTGGGCGTTGATGGATGCTGCTATTGTGGTAGCGTCCGTCGACCATGGTGAAGAATTGAAGCGCCGAAGAGACGAAATTGTGGAGCGCCTTTACGTGGCAAGTTTGGTGCCACCACCAAGGTGTCAGAACTGCGATGCCGACAATGACAAAGAGGCAAAGGATCCTCACAGAGGCTTGTTTGACAACGAGCAAAAGAAGATATTGGAGATTAAAGACCAGCTCGAAGATCCTCACCAGTCTGAAGATTTGTTGGTGGAGTTGCTGCAGAATCTAGCTGACATGGATATTACATTCCAAGCGTTAGAAGAGACTGACATTGGTAGGCATGTAAACCAGTTGCGGAAGCATTCATCTAATGATGTTAAAAGATTGGTGAAGTTACTTGTCAGGAAGTGGAAGGAAATTGTAGATGAATGGGTGAAGTTGAAAACACCGGGAAAAACTGATACTGTTGCCATGGACAAGGACTCGCTTCAACAGAAAATCTTGCAAAATGGGCATAGTCAGGTCAAAGATATATTTTTTACCATTCAGTGCTTTTCCATAGAAAGGAGGTATTTCCATTGGCAATTTGGCTTTCTAATGTTCCATTACTTTTGTAGATTCTTGATTTGGTATACTCGCCAAAGCCACATAGTGAATGAGAGTTTTGGGTCAGAGTGCAATAATAGTGTTGAACAACAATTAAAACCAAAAGCAATTCCTAGTAAAGAAGCTCCCCCAAAACCATCGCCATCAGCCACTATTCCAGTTCTTGCTCCTCCTCAAAACAGACAAAGAGAAAGCAATTTTGACCCAGATAGATTTGCTTCAGCGAGAAAACGGCTTCAAGAGAACTACAAAGAGGCCGCAATTGTCAAAAAGCAAAGAACCATTCAAGTGATGGATCTCCATGAGCTACCAAAGCCCAAGAATGCCTCCATTGGAAAAAACAAAGGCGGCTTCGGTCAGGGACGGCTTTAG 1176 0.415 MDLEDFRSILESAGVDVWALMDAAIVVASVDHGEELKRRRDEIVERLYVASLVPPPRCQNCDADNDKEAKDPHRGLFDNEQKKILEIKDQLEDPHQSEDLLVELLQNLADMDITFQALEETDIGRHVNQLRKHSSNDVKRLVKLLVRKWKEIVDEWVKLKTPGKTDTVAMDKDSLQQKILQNGHSQVKDIFFTIQCFSIERRYFHWQFGFLMFHYFCRFLIWYTRQSHIVNESFGSECNNSVEQQLKPKAIPSKEAPPKPSPSATIPVLAPPQNRQRESNFDPDRFASARKRLQENYKEAAIVKKQRTIQVMDLHELPKPKNASIGKNKGGFGQGRL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01669 337 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 81 162 IPR035441 -
Pste3g01669 337 Coils Coil 101 121 - -
Pste3g01669 337 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 232 334 IPR044790 -
Pste3g01669 337 MobiDBLite consensus disorder prediction 250 282 - -
Pste3g01669 337 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 77 167 IPR035441 -
Pste3g01669 337 Pfam TFIIS helical bundle-like domain 104 153 IPR017923 -
Pste3g01669 337 SMART TFS2_5 84 155 IPR003617 GO:0005634
Pste3g01669 337 CDD TFIIS_I 81 154 - -
Pste3g01669 337 ProSiteProfiles TFIIS N-terminal domain profile. 82 156 IPR017923 -
Pste3g01669 337 MobiDBLite consensus disorder prediction 253 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01669 Pste-Chr3 10533243 10535267 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pste3g01669 Med26 7.1e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01669 3 10533243 10535267 Pste3g01669 3 10533243 10535267 ECH
Pste2g03681 2 40173335 40176596 Pste3g01669 3 10533243 10535267 ECH
Pste3g01669 3 10533243 10535267 Pste2g03681 2 40173335 40176596 PCT