Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01635 AGCCTCTCTCTTCTCCCCACCCGTTTCCATAACAGCAGAGAAGAACCTTCAGAAACCCTAATTTTCTCAAAGCTTCAGAAGGCACATAACAACCACCACCTCTTTTCCCGGAGCAATGGTCGCCGCCGATGTATCCGCCGCCGCCGCCGCCCCGTCGCGCCAGCTGACGCAGAAGGAGTCGGACATCCAGCTGATGCTCGCCGCCGACGTTCACCTCGGCACCAAAAACTGCGACTTCCAAATGGAACGTTACGTCTTTAAGCGCCGCACCGATGGTATCTACATAATTAACCTTGGGAAGACGTGGGAGAAGCTCCAGCTTGCTGCTAGGATTATCGTTGCCATTGAGAACCCTCAAGATATCATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGGGCCGTTCTTAAGTTTGCTCAATACACTGGTGCTCATGCGATTGCTGGAAGGCATACTCCTGGAACATTCACTAATCAGATGCAGACATCCTACAATGAGCCTCGTCTTCTAATTCTAACTGATCCAAGAACAGATCACCAGCCCATTATCGAAGGTGCTCTTGGAAACATACCAACCATTGCTTTTTGTGACACTGATTCTCCAATGAGGTATGTTGACGTTGGGATTCCAGCCAATAATAAGGGGAAGCATAGCATTGGCTGTCTCTTTTGGCTATTAGCTAGGATGGTGTTGCAGATGCGGGGTACAATTCGTCCAGGGCACAAGTGGGACGTAATGGTGGATTTATTCTTCTATAGAGAACCCGAGGAAGCCAAGCAACAAGAGGAAGATGAAGCACCAGCTCCTCAAGATTTTTCAATTTCGGACTTCAATGCTGCTGGCATTGGCAGCTTCCCTGCTGATAGCCAATGGCCTGCTGCAGTTGATCAACCCTGGTCTGGAGAAGCTCCACAACCAATCGCAGCAGTTCCTACTAATAACTGGACCCCAGAAACAACTGGAGATTGGGGTGATTCTGTTCCAGCTCCAGAAGTTGTTGTGCCTCCCGCCCAAGCCGCTCCCGCTACTGGCTGGGACCAGCTTTAGACAAGAGGTTTTGTTTCCATGGTGTTAAAACCATAGGTTTTTCTTCCCTTCGGCTCAGAAATTTCCCTTCCTTGTTAGAAAATAAACATTACTTATTATTGAGTCTCAGTAAAATTTTGTTTGTTGACATATTCTAGGAAACTTAATGCAGTAATTTAATTGTTGCATATTGGATTTATATCGTTTGCTGCAATAAGTTTGCGTTTGATTTTATGGCAATGATTTGGG 1273 0.4713 MVAADVSAAAAAPSRQLTQKESDIQLMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIIEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEEAKQQEEDEAPAPQDFSISDFNAAGIGSFPADSQWPAAVDQPWSGEAPQPIAAVPTNNWTPETTGDWGDSVPAPEVVVPPAQAAPATGWDQL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01635 309 Hamap 40S ribosomal protein SA [rps-0]. 11 255 IPR027498 GO:0003735|GO:0006412|GO:0015935
Pste3g01635 309 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pste3g01635 309 PRINTS Ribosomal protein S2 signature 166 180 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pste3g01635 309 PRINTS Ribosomal protein S2 signature 103 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pste3g01635 309 PRINTS Ribosomal protein S2 signature 24 42 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pste3g01635 309 PRINTS Ribosomal protein S2 signature 54 63 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pste3g01635 309 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pste3g01635 309 MobiDBLite consensus disorder prediction 259 309 - -
Pste3g01635 309 ProSitePatterns Ribosomal protein S2 signature 2. 128 152 IPR018130 GO:0003735|GO:0005840|GO:0006412
Pste3g01635 309 PANTHER 40S RIBOSOMAL PROTEIN SA 14 306 IPR005707 GO:0003735|GO:0006412|GO:0015935
Pste3g01635 309 MobiDBLite consensus disorder prediction 268 282 - -
Pste3g01635 309 FunFam 40S ribosomal protein SA 23 229 - -
Pste3g01635 309 Gene3D - 23 228 - -
Pste3g01635 309 SUPERFAMILY Ribosomal protein S2 19 209 IPR023591 -
Pste3g01635 309 Pfam Ribosomal protein S2 27 122 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pste3g01635 309 CDD RPS2 27 193 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pste3g01635 309 NCBIfam 30S ribosomal protein S2 20 215 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01635 Pste-Chr3 10324594 10328048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01635 11 272 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 75.758 7.96e-150 420