Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01597 CTTCATTCCGACATCATTCACAATTCACGAGACACAAACCTCAGCCATCAGATTCATATTCAAAACTAATGGATTAGCCAAAAACACCTATAAAAATATATTGGTGACCCATGGTCATCAACTCACTAAACCCGTTCTGCCAACATAATGGCCGCTTATTCTCTTGTCTATATCTCTCTCTCCCTCGTCCTAACCCTCTCCTCCGCCTCGCACCACCACTCCCATTCCCCGCCCATCACCGTCAACGCGGCAGCAGGGGCCATCCAACAAGCCTGCACAGCCACGCGCTTCCCGCAGCAATGCCAAGCCTCCCTCTCCCAATCCCCCAACCTCCCTCAGAATCCCACCGCTCTCCAACTCCTCCAATCCGCCATTGCTCTCTCAGCCCACAACCTCACCACCGCCCTGTCCATGGTCAAGTCCCTCCTCGACGCCTCCGCCGACAGCCACAACCGCACCGTCGCCGCCGCCACCTGCATCGAAATCCTCGCCAACAGCCACCACCGCATTTCCCTCTCCACCGATGCACTCCCACGCGGCAGGACCAAGGACGCGCGCGCGTGGCTCTCCGCCGCCCTCGCCTACCAGTACGACTGCTGGAGCAGCCTTAAATACGCCAACGACACACAAATGGTCAGCAAAACGATGTCGTTTATCGACAACCTCCAAACTCTCTCCAGCATCGCCCTCAGCATGGCCTTTTCCTTTGACGCCTTCGGAAACGACATCGCTTCCTGGAAGCCCCCCATGACCGAGCGCGACGGCTTCTGGGGGACCACCGCCTCAGATGCCTCCCCCTCTTCCCCAGGGGTTCCGTCTAATTTAACGCCCCACGTTACTGTCTGTAAGACTGCAGGGGACGCCTGTTATAAGACGGTGCAGGAGGCCGTTAACGCCGCTCCTGATAACGCCCTTGGCCCAGACAAGTTTGTCATCCATATAAAAGAAGGCCTTTATGAGGAGACCGTTAGGATTCCCTTATCTAAGAGTAATGTGGTTTTCTTGGGCGACGGCATCGCCAAGACCGTCATCACCGGCCACGCCAACGTCGGCCAACTGGGGATCACAACATACGACTCCGCCACCGTCGCTGTTCTTGGCGATGGATTCATGGCAAAGGATCTCACGATCGAAAACACAGCAGGTCCTGACGCTCACCAAGCAGTGGCATTGAGATTAGACAGTGATCTTTCTGTGATTGAGAACTGTGAATTCTTAGGCAATCAAGACACTCTCTACGCTCACTCCCTGCGCCAATTTTACAAGTCTTGCCGCATTGAGGGCAACGTGGACTTCATCTTTGGAAACGCCGCATCAGTTTTCCAAGACTGCACGATCCTAGTTCGTCCGAGGCAAGTGAAGCCAGAGAAGGGAGAGAACAATGCCATCACAGCACATGGCAGAACAGACCCTGCACAAGCCACAGGGTTCGTTTTCCAGAACTGCTTGATTAATGGCACTGAGGAATATATGGCATTGTACCACAGCAAACCTCAGGTGCACAAGAACTATTTGGGAAGGCCCTGGAAGGAGTATTCTAGAACAGTTTTCATTAACTCGACTTTGGAGGTTCTTGTCACACCCTCGGGTTGGATGCCATGGACTGGTGACTTTGCCCTCAAGACACTTTACTATGGGGAGTTTGAGAACAAGGGACCTGGTTCTGATTTGTCTCAGAGAGTGTCTTGGAGTAGCAAGATCCCTGCTGAGCACGTGTCAACGTATTCAGTGCAGAATTTCATTCAGGGAAATGATTGGATTCCATCATCTGTTGGTAGCCCATCGTCCTAAGATTAAGAGTGAACATTAGGAGCATAGTAAATGGGGGACTTTTATTCACCTCCTTTCTAATTACCAATTTACAAATACAATAACAATGTCATTGTCTATCGGGATTAGCCTATTTTCAAATCAATTTGAGGCGTGCAGGTAAATACAAAGGATTGTTTATTGGGATGACTGAACCCTATTTTGATGATTTAACGTGTTTGGTTTTAAGTTTAAATCATGGAAACCGATGTTCAACGTAAATGGTTCAAAATCTTGCGTCTTGATTATATTTTAGAAAATTTTTGAATTCTCATTTGCA 2089 0.5022 MAAYSLVYISLSLVLTLSSASHHHSHSPPITVNAAAGAIQQACTATRFPQQCQASLSQSPNLPQNPTALQLLQSAIALSAHNLTTALSMVKSLLDASADSHNRTVAAATCIEILANSHHRISLSTDALPRGRTKDARAWLSAALAYQYDCWSSLKYANDTQMVSKTMSFIDNLQTLSSIALSMAFSFDAFGNDIASWKPPMTERDGFWGTTASDASPSSPGVPSNLTPHVTVCKTAGDACYKTVQEAVNAAPDNALGPDKFVIHIKEGLYEETVRIPLSKSNVVFLGDGIAKTVITGHANVGQLGITTYDSATVAVLGDGFMAKDLTIENTAGPDAHQAVALRLDSDLSVIENCEFLGNQDTLYAHSLRQFYKSCRIEGNVDFIFGNAASVFQDCTILVRPRQVKPEKGENNAITAHGRTDPAQATGFVFQNCLINGTEEYMALYHSKPQVHKNYLGRPWKEYSRTVFINSTLEVLVTPSGWMPWTGDFALKTLYYGEFENKGPGSDLSQRVSWSSKIPAEHVSTYSVQNFIQGNDWIPSSVGSPSS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01597 547 FunFam Probable pectinesterase/pectinesterase inhibitor 51 37 186 - -
Pste3g01597 547 FunFam Pectinesterase 223 545 - -
Pste3g01597 547 SUPERFAMILY Pectin lyase-like 228 540 IPR011050 -
Pste3g01597 547 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 186 IPR035513 -
Pste3g01597 547 CDD PMEI-like_3 42 183 - -
Pste3g01597 547 Gene3D - 223 544 IPR012334 -
Pste3g01597 547 Pfam Pectinesterase 230 535 IPR000070 GO:0030599|GO:0042545
Pste3g01597 547 Pfam Plant invertase/pectin methylesterase inhibitor 38 183 IPR006501 GO:0004857
Pste3g01597 547 PANTHER PECTINESTERASE 16 539 - -
Pste3g01597 547 NCBIfam pectinesterase inhibitor domain 10 182 IPR006501 GO:0004857
Pste3g01597 547 SMART PMEI_2 34 183 IPR006501 GO:0004857
Pste3g01597 547 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 183 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01597 Pste-Chr3 10063071 10065835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01597 27 537 Carbohydrate Esterase AT5G09760 62.984 0.0 682