Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01571 TTAAGAAGTAAAGAAGGCCTCCACTCCACCAAACACACGTATGGAACGACTCACTTAATAACAAGTCTTTTCTTCTCTCTAAACTGTAATCAGAATTAGAATGCCGGCTTGGTGGAGTAAAAAGTGGAGCAAGAGCAAAGAAGAAGAGAAGAAGAAGAAGAAGAAGCTGAAAGGGGTTCCGTTACCTCGTCCCGATCAAACCTTTGGATCTCTTTCTCTTTCTCTTTCTCTTTCTCACTCCGCCTCCAGCGTCAGTTCCTCTGCTTCCTTCGAAGATCATTCCAACAGAGCACAAGATGAGGTGAGGTCAAGAGGACCTACCTCGCCCCTTCATCCATTGCCTCTTCCTCCGACTAGTCCTTCTTCTGTGCTTTCCTACCCACAATTTCGACTTTTGGAAATCGCTTCCACCAAATGGAGAAAAGGAAAGCTTCTTGGACGCGGTACTTTTGGCCATGTATATCTCGGATTCAATAGTGAAAATGGACAAATGTGTGCCATAAAAGAAGTCAAGGTTGTCTCCGATGATCAAACATCAAGAGAGTGCCTCAAACAACTTAACCAGGAGATAAATTTGCTAAATCAACTTTCACACCCTAATATTGTTCAATACTATGGGAGTGAACTGGTATGCTTCGCAATCATTTTAACCCTGTATATACCTAATATAGCTGTGTTCACACTCGGAAGAGACATTGAAGAATTTCCATCACCATGTGTAGAAGGATCACTTTCTGTATATTTGGAATATGTCTCTGCTGGTTCTATCCATAAATTACTTCAGGAGTACGGTCCATTTAAGGAGCCTGTTATTCAAAACTACACCAGGCAGATTGTCTCTGGACTTGCCTATCTGCATGCAAGAAATACAGTGCACAGGGATATTAAAGGGGCAAACATACTAGTCGATCCTAATGGTGAAATCAAACTGGCAGACTTTGGAATGGCTAAACATATAAATTCTTCTGTCTCAATGCTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTAATGAATACAAATGGCTATAGTCTTCCAGTTGATATATGGAGCTTGGGATGCACAATTATTGAAATGGCAACATCAAAACCTCCATGGAGTCAATATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATCCCTGAACATCTTTCGAATGATGCAAAGAATTTCATCAAGCAATGCTTACAAAGAGACCCATTAGCTCGCCCAACAGCCCAAAGGTTACTACAACACCCCTTCATTCAAGATCAATCAGCAAAAACTGCAAATGTCAGCATAACCAAAGATGTTTTCTCTTACATGTTTGATGGAAGCGGGACACCGCCTGTGTTAGAGTCCCATTCCAACCGGAGAAGTATAACTTCGCTTGATGGAGACTATGCATCTAAGCCAATTCTTTCAGCTCCTCGGGCATTAAGGAGTCCAGGAGATAACACAAGAATGATCACATCTTTACCAGTATCTCCCTCTTCAAGTCCATTGCGACGGTACGGACCAACACATCAGAGCTGTCTCTTTTCTCCACCTCATTCAGCTTACACAATAATGGGACAAAATAGTTACACTTTGAATGACCCATCCTCATATCCATTGAGATCAAATGCCACGTTCACTCTTGATCCTTGGCATGAAACATCACGATACAAAACCAATACGCCACCTGGGGGATCTCCAAGAATGAGATTCATTTGAGTTGAAATTTGTAAATAGCTATAGAATTAAAATATTTCTACGTCTCCCCAGCATACCTTGTGGTCTGTGGTTGAACTTCAATCTGGACTTTGAAGCACTAACTATCCTAGAGATTCTACTGGTCCATTCTTTATACATGAGAACCAGATGACGGAAGAAATGATTCTGGCTCTGTGCTCTCGGTGCATTGGATTGGGAAGACCTTGCTATCTGTAAGAATTTCTTGATTATTGTAAATGCAAATGTGCTTACTGTGTTTGTAGTCTCGTCTATGTTGTATAATGCTAGTTTATGGCAAAATAAAAAGAAATAAGAAATTTTCATATCCA 2055 0.4097 MPAWWSKKWSKSKEEEKKKKKKLKGVPLPRPDQTFGSLSLSLSLSHSASSVSSSASFEDHSNRAQDEVRSRGPTSPLHPLPLPPTSPSSVLSYPQFRLLEIASTKWRKGKLLGRGTFGHVYLGFNSENGQMCAIKEVKVVSDDQTSRECLKQLNQEINLLNQLSHPNIVQYYGSELVCFAIILTLYIPNIAVFTLGRDIEEFPSPCVEGSLSVYLEYVSAGSIHKLLQEYGPFKEPVIQNYTRQIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSVSMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTIIEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKNFIKQCLQRDPLARPTAQRLLQHPFIQDQSAKTANVSITKDVFSYMFDGSGTPPVLESHSNRRSITSLDGDYASKPILSAPRALRSPGDNTRMITSLPVSPSSSPLRRYGPTHQSCLFSPPHSAYTIMGQNSYTLNDPSSYPLRSNATFTLDPWHETSRYKTNTPPGGSPRMRFI 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01571 541 MobiDBLite consensus disorder prediction 451 474 - -
Pste3g01571 541 ProSiteProfiles Protein kinase domain profile. 106 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01571 541 Pfam Protein kinase domain 107 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01571 541 SMART serkin_6 106 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01571 541 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Pste3g01571 541 SUPERFAMILY Protein kinase-like (PK-like) 105 481 IPR011009 -
Pste3g01571 541 MobiDBLite consensus disorder prediction 52 88 - -
Pste3g01571 541 MobiDBLite consensus disorder prediction 455 474 - -
Pste3g01571 541 MobiDBLite consensus disorder prediction 1 32 - -
Pste3g01571 541 CDD STKc_MEKK1_plant 105 392 - -
Pste3g01571 541 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 23 398 - -
Pste3g01571 541 Gene3D Transferase(Phosphotransferase) domain 1 103 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01571 Pste-Chr3 9781918 9786269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01571 106 453 MAP Kinase Kinase Kinase AT1G53570 65.616 3.02e-158 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pste3g01571 Pkinase 9.7e-72 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01571 3 9781918 9786269 Pste3g01571 3 9781918 9786269 ECH
Pste3g01571 3 9781918 9786269 Pste2g03727 2 41406066 41411260 PCT