Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01552 GAAGAGGAGGCGGGTGTTGGGAAGAGCCAGTTTATGGTTAAACCACGATATCTTTTTTATTTTTGTTTCTCGTAGCGTATGGAAAACCACCAAAACCACAAGGGAGAGGGAGAAGAAGAACCTGACATAGAGAAGAGCCAGCATCGGCAGCAACAAGCGTGGGGCACGTGGGAGGAGTTGTTGCTAGCGTGCGCCGTGAACCGCCATGGCTTCAAGGACTGGGACGCCGTCGCCATGGAGGTTCAGTCGCGGACCACGGCGCGCTTCCTCACCACCGCGCGCCACTGCGAGCAGAAGTTTAACGATCTCAGCCACCGATTCAACGACGGCTCTCCGCCGCCGCAACAGAACGGCGCCGCCGGAGGCGGCGGCGACGACAACTCCGATCACGTCCCCTGGCTCGACCAATTGCGGAAGCTCCGCGTCGCTGAGCTTCGTCGCGAGGTCCAGCGCCGCGACGATTCCATTCTGACGTTGCAGTTGGAGGTGAAGAGATTGGAGGAGGAGAAGGCGAAGGAAAATGACGGAAAAGAAGATGAGAAACCAGATCTGGCGGTTTCCGGCGAAGCGCGGCCGGAAAACGACAAAACCGGCGGAGAAGTTGAGGAGGCTGGACCGGCGAATTCCGAACCGGAAGAGAGAACCGAGAACGCGGACAAGAGTCTGCCTACCACGGGCGATGAATCGGACCGGGAGAATCAGTCGGTTAACGAATCCAACTCGACCGGTTCGCGGTTTGAGAAAACCGGAGAAGGTGACAAGAAAACAGGAATCGGACCGGCCCCGGTTCAGACCGGCTCACAAGAACCGAATCCGGTCACGCGAAAACCGGTCGAGGAGGAATCGAATAACGGAAGCTACGATGCGTTGGCGAAGGTGCCAACGTGCGAGTCGGTGCCTCCGAGTGAGGAGCGGAAGGTGGAGGAGGAGGATGATGACTCGTCCGAGTTGCATGATTCGGTGGCTCACTCGGGCGAGGGAGCGACGAGGGAGAGTAGTGAGGTGCAGAGTTCCGCGAGCTTGACGCGGAAGAGGAAGTCGCGACGACGGAAGGACCTTTCTGGCGGAGATGGTCGCGGCGGCGGCACGTCTTCTCCGCAGGAGAACGAGGAGGTGGCCATGGTGAAATCAGAACCGTTGGCTGTGGTTTTAGAGTTGATCAAGGGACACGAACACAGCTCATTGTTCGAGCGCCGTCTTGAAAGCCAGCAGGATTCGGATGGATACAAAGACATAGTGAAACAGCCCCTGGACTTGGAAACCATACAGTTGCGACTCCAAAAGGGTCATTATGCCTCATGCACTAGTGCATTCTTCCGTGACCTCCTCCTCCTCTTCACCAACGCCACCGTGTTCTTCCCTCATGACTCCACCGAAGCGCAGGCGGCGCGGCAGCTTCACCACCTTGTCACCGCCGAGATAAAGAACCATGGCCAAGCACAATCCGATCCTATACCCCGGAAGAATGATTCCGTCCCTCCAAACGCGTCATTAGCCAAACCAGATTCTCTCTTATCGAAGAACAAAGCCTCTGGTCCTATATTGGTTTGTCGCAAACGCAGTTCAATGTCAGCGAAACCTTCCTCATCCACCTTTGGCCACAAGGGTGATCAACCCATCTTCAATGACAAGAAGGAAAGACCGTCTTCTGATGCTAAAACACCCATCAAACCCTCTTCTGATACAGACGAAGAGGAGATTCCCAAGGCTAAGGAAAAACCTGTCACTGGAGCAAGAAGCTTGAGGAGGAGCAGCAACAAGAACATCAACAATAAAAAGCTTTCCGCCAACTCCACTCCCAAGGCAGGGTCCTCGGGGAACAAGCCACTGGAGACCCTTAAGCCGGAGAAGAGCAAAGCAGAGGCAGCTCCAGACAAGAAGAGGAGTGCTGCCGCAGATTTCTTGAAACGGATTAAGCGAAACACTTCAGCAGAAGCATCGAAGGGTAGCGGTGGTAGTGGTGGTGGTGGAGGAGGAGGAAGTAGTAGCAGCAGCAAAGGTGCTGGTGGTGGTAATGGTTCCAAAGAGCATAAGAAAGTGGTGAATAATGGAAAGGGCGAGAAAGGGAAAGAAAGAGTTTCAAGGCATAACGTTGGAGGAGGTTCAGGGTCAGGTGATAAAAGGAATAAGAATGTTGAGAACAACTCTCAGTCGAAGAGGAGTGTTGGTAGACCTCCAAAAAAAGCAGCAGAGTCAAATGCAGGTAGTAAGCGTGGGAGGGAAAGTAGTGCTAGTGCTGGCAAAGATAAGCGACCTAAGAAACGTTCCAAGAAATGATTCAAAGTTTCATAGTTAGCCTCTTTTGTTCGTCCCCTGTATATTATTATTATTATTATAATTATCATTATTATTTCAAAGCATGTGTTTCTTTCTTTATTTTATACTGCTAATTTATTGATCAGCTGTAGCTTCTAGGCAGTTGTCAGCAGGTACATGTAACAGTATTTTCATTTGGGCTAAACCTTGTAACCTTTTGC 2477 0.5228 MENHQNHKGEGEEEPDIEKSQHRQQQAWGTWEELLLACAVNRHGFKDWDAVAMEVQSRTTARFLTTARHCEQKFNDLSHRFNDGSPPPQQNGAAGGGGDDNSDHVPWLDQLRKLRVAELRREVQRRDDSILTLQLEVKRLEEEKAKENDGKEDEKPDLAVSGEARPENDKTGGEVEEAGPANSEPEERTENADKSLPTTGDESDRENQSVNESNSTGSRFEKTGEGDKKTGIGPAPVQTGSQEPNPVTRKPVEEESNNGSYDALAKVPTCESVPPSEERKVEEEDDDSSELHDSVAHSGEGATRESSEVQSSASLTRKRKSRRRKDLSGGDGRGGGTSSPQENEEVAMVKSEPLAVVLELIKGHEHSSLFERRLESQQDSDGYKDIVKQPLDLETIQLRLQKGHYASCTSAFFRDLLLLFTNATVFFPHDSTEAQAARQLHHLVTAEIKNHGQAQSDPIPRKNDSVPPNASLAKPDSLLSKNKASGPILVCRKRSSMSAKPSSSTFGHKGDQPIFNDKKERPSSDAKTPIKPSSDTDEEEIPKAKEKPVTGARSLRRSSNKNINNKKLSANSTPKAGSSGNKPLETLKPEKSKAEAAPDKKRSAAADFLKRIKRNTSAEASKGSGGSGGGGGGGSSSSSKGAGGGNGSKEHKKVVNNGKGEKGKERVSRHNVGGGSGSGDKRNKNVENNSQSKRSVGRPPKKAAESNAGSKRGRESSASAGKDKRPKKRSKK 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01552 732 MobiDBLite consensus disorder prediction 496 510 - -
Pste3g01552 732 MobiDBLite consensus disorder prediction 553 580 - -
Pste3g01552 732 SMART sant 24 80 IPR001005 -
Pste3g01552 732 MobiDBLite consensus disorder prediction 652 669 - -
Pste3g01552 732 Gene3D - 351 465 IPR036427 GO:0005515
Pste3g01552 732 MobiDBLite consensus disorder prediction 586 617 - -
Pste3g01552 732 MobiDBLite consensus disorder prediction 681 696 - -
Pste3g01552 732 Gene3D - 19 77 - -
Pste3g01552 732 MobiDBLite consensus disorder prediction 630 644 - -
Pste3g01552 732 MobiDBLite consensus disorder prediction 450 732 - -
Pste3g01552 732 MobiDBLite consensus disorder prediction 143 174 - -
Pste3g01552 732 MobiDBLite consensus disorder prediction 235 254 - -
Pste3g01552 732 MobiDBLite consensus disorder prediction 512 552 - -
Pste3g01552 732 CDD SANT 27 59 IPR001005 -
Pste3g01552 732 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 16 732 - -
Pste3g01552 732 SMART bromo_6 126 453 IPR001487 GO:0005515
Pste3g01552 732 SUPERFAMILY Homeodomain-like 21 61 IPR009057 -
Pste3g01552 732 CDD Bromodomain 357 448 - -
Pste3g01552 732 MobiDBLite consensus disorder prediction 300 314 - -
Pste3g01552 732 SUPERFAMILY Bromodomain 354 453 IPR036427 GO:0005515
Pste3g01552 732 MobiDBLite consensus disorder prediction 143 345 - -
Pste3g01552 732 MobiDBLite consensus disorder prediction 77 105 - -
Pste3g01552 732 Pfam Myb-like DNA-binding domain 26 60 IPR001005 -
Pste3g01552 732 Coils Coil 123 150 - -
Pste3g01552 732 MobiDBLite consensus disorder prediction 1 21 - -
Pste3g01552 732 MobiDBLite consensus disorder prediction 181 208 - -
Pste3g01552 732 MobiDBLite consensus disorder prediction 1 25 - -
Pste3g01552 732 Pfam Bromodomain 358 438 IPR001487 GO:0005515
Pste3g01552 732 ProSiteProfiles Bromodomain profile. 362 434 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01552 Pste-Chr3 9659647 9665631 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste3g01552 Bromodomain 9.9e-12 No_clan