Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01507 CAATGAGCAATGAGCATGTGCCACGTGGTGGCTGCTGTCCTATAAATGTGAAGCTCACCCGTCCCTTCTCAAGTTCCAAGACAATGCAAGGAGAATTGGAATTACCACCAGGCTTCAGATTCCACCCCACCGACGATGAACTCGTCAATCACTACTTGTGTCGGAAGTGTGCTTCCCAGACCCTTGCTGTTCCCATCATCAAAGAAATTGATCTCTACAAGTTTGATCCATGGCACCTTCCAGAAATGGCTCTTTACGGTGAGAAAGAGTGGTACTTTTTCTCCCCTCGTGACAGAAAGTACCCAAACGGTTCGAGGCCCAATCGGGCCGCCGGAACCGGGTACTGGAAGGCAACCGGTGCGGACAAACCCATCGGGAAACCCAAAGCCCTTGGAATAAAGAAGGCCCTCGTGTTCTACGCGGGCAAAGCCCCCAAGGGGGTCAAGACCAACTGGATCATGCATGAATATCGCTTAGCCAACGTCGACAGATCCGCCTCCAACAAAAACAAAAACAACCTAAGGCTTGATGATTGGGTGCTATGCCGAATTTACAACAAGAAAGGGAAGATTGAGAAGTACAATGGAGTTGAGGTGGCAGAGGAAGAGCACGAGACCAAGCCTGAGATCAACACGTATGGCCACCAATTGTACATGGACACGTCAGATTCGCTACCCAGGTTGCACACGGATTCAAGCTGCTCCGACCACGTGGTTTCGCCGGATGGGGAGGTGCAGAGCCAGCCCAAGTGGAATGACCTTCAATTGGGCCCAGACCCACTTCCTGGTTTTGATTGTCATTTCTTGGATGACCCTTTTGCCCCTCAGCTCCACTCCCCATGGCAGGATATGTTCGCCTACCTACCCAAGACATATTGATCTTTTAGGGTCACCTTTTCATTTTTTCTTTTTTAAATTCATTCAACACTAAAACAGCATCAAATCTCATTAAATGGTACCTAACTACTGCTGCTGCTGCACGTGCAGTGACTATTGTCTCTTGTTCAATTTCTCTCACTAAGGAAAAATGAGATCACGTGTGACTAAAAATAAGAAAAATGATCTCCTCTGGGTGAAGAAAGAAGATTCACTGTGTTAGGAATTGTGTCAAAATGTAACAAACACCCCCCTAGAAAATTCTTGTTCCATTGCTACCTATTGTAATAGCATTTTTTGTACGTCTGTCATATATATTATTATATTTTTTTATTTATCAAAGTAAAGCAGTAGTTGAAATGTAATGTTTCATCTTCGTGCGAAA 1260 0.4556 MSNEHVPRGGCCPINVKLTRPFSSSKTMQGELELPPGFRFHPTDDELVNHYLCRKCASQTLAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASNKNKNNLRLDDWVLCRIYNKKGKIEKYNGVEVAEEEHETKPEINTYGHQLYMDTSDSLPRLHTDSSCSDHVVSPDGEVQSQPKWNDLQLGPDPLPGFDCHFLDDPFAPQLHSPWQDMFAYLPKTY 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01507 291 FunFam NAC transcription factor 43 190 - -
Pste3g01507 291 SUPERFAMILY NAC domain 24 186 IPR036093 GO:0003677|GO:0006355
Pste3g01507 291 ProSiteProfiles NAC domain profile. 34 186 IPR003441 GO:0003677|GO:0006355
Pste3g01507 291 Pfam No apical meristem (NAM) protein 35 158 IPR003441 GO:0003677|GO:0006355
Pste3g01507 291 PANTHER NAC TRANSCRIPTION FACTOR 56 34 225 - -
Pste3g01507 291 Gene3D NAC domain 43 191 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01507 Pste-Chr3 9311048 9312453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01507 28 276 NAC Transcription Factor Family AT5G08790 67.170 1.31e-118 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste3g01507 NAM 2e-38 No_clan