Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01498 GAACAGAGAAGAGAAAGAGTAGCAATGATTTGATGTTGAGTGAAATGGAATAGGCGATGAATTGAAGGTGAGAGAAGCAAGAGCGAGCGTGAGTGAAACGCACACTGCGTGAATCCTCTTTGAACTTGCTTCAACTGGATCTGCAGCACTGAATTTTCTCTATTCTACGCCTCTGGTTTATGATTGAAGCAAAACCATATTTTGTCTCTGTTGGAATGCTGCTGTTTAGTCTTTTCTTCATGATGATTCTTAGTGCAAAAGAAGGCTTTCAGAACTCAGTTGAGTTAATGTTATTGAAGTAGAGTAGGAAACACCCAATTGTGGCTTTCAATCTGAGGACAGAACTGATCAGATGGGCAGAGAACATGATTCTGCAGTGGCAAAGGAAGAAATCAGTGATGATGGTTTCTCCAGTGTTGAAAATGGGGATTTAGAATCTCACGCTCGAATTAGTCTTGACAAGGAGACAGGTTTGGGAACTTGTCGTGTGTGCCAATGTACTGAATCTGATAAAAAGGCAGATGCTGCCCTAGAATTTTTGGGCATCAATCCAGGTTCAGAGGTGTGTAAAAGCAAAGGGAAAGTGGGGTCTGATGCTGATGGAATTCCCAAAAATATGTCTCTTAACAGAAATGTTGAAAACAGTACTGGGATGGTGCAATTTGTAAGCCCTGACGGGGAGGTTTTCATTTGTAAAAGCGATTTGGAACTTGGTTTGTCTCATCAAGATAAATTAGTTGAACTTGGATGTTCTTGTAAAAATGACCTCGCTTTAGTACATTACGCCTGTGCACTCAAGTGGTTTGTCAATCATGGATCTACCATATGTGAAATATGTGGACATATAGCAAATAATATCAGAATTTCTGACTTCAATAAGGTTGTTGGTGCTTTGAAGGAGTATGAAGTATTGAGGGAAAGAACTGCTAGTGGGGATCCTGGTCCTACACAAGTTCATGCAAATGCTGGTGTGGATCCTGATGCAGTGGCTGCTATCCGGAGGCAACGGCTAAGTGAGATTGCACTATGGTTTTGTCCTCATAGTAACAGTCACAATAACAACCTTAGCAATGTGGACACAGTTTCACAGATTGTTTCTGAGCAGCCTTTGAATATTGTTACTGAAGATGCTGTCCCTGTACAGAATCCTGCAACCAAGTGGGCAGTGGAGGGTACAGGGATCCTACTTGCTACAGGGCTTCTTACCATCACCCTTGCATGGCTTATAGCTCCTCGTGTTGGAAAGAAAACTGCTAAAAGTGGTCTTCATATCTTACTTGGAGGTGTTTGTGCTTTAGCCGTGGTGATTTTCTTCCGCTTTTTTGTGCTTACCAGAATCAAGTATGGACCAGCACGTTACTGGGCAATCTTGTTCGTTTTCTGGTTTCTTGTCTTTGGAATATGGGCTTCAAGGACCCATGGTGCCCATACTACGTGATCCTTTAGTACAGTGTTTTAGATCTTTAAGTCCTTTGTCTCTCTAGGACAAAAAATCCTTTTCCTTCCCATCTCTTCTTAAATTTCCTTACCATCTTGAATTTTTAGATTTTGAATAGATATTCATTATGATACGACTTATGAGTCTATTTGGTAGATTCTCATATTTGTACAATGTAAAATAACAATTATGGTGTTTGCAAGCTAGATTTCGGAATGCTAGTTGTTTTCAGATTTTTCACACGCAACATTATATGGATGTGGGTGAACATGTGTAATCCTGGGCTCCGTATGTACTTGGTCATGAAAAAATATCCGAACTTGAGAAATTGCAAACCATTCGTTAAATAAGTATTAATGTGGTACTTGTCAATGGGACAGCCATC 1823 0.4043 MGREHDSAVAKEEISDDGFSSVENGDLESHARISLDKETGLGTCRVCQCTESDKKADAALEFLGINPGSEVCKSKGKVGSDADGIPKNMSLNRNVENSTGMVQFVSPDGEVFICKSDLELGLSHQDKLVELGCSCKNDLALVHYACALKWFVNHGSTICEICGHIANNIRISDFNKVVGALKEYEVLRERTASGDPGPTQVHANAGVDPDAVAAIRRQRLSEIALWFCPHSNSHNNNLSNVDTVSQIVSEQPLNIVTEDAVPVQNPATKWAVEGTGILLATGLLTITLAWLIAPRVGKKTAKSGLHILLGGVCALAVVIFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHGAHTT 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01498 361 SMART ringv_2 113 163 IPR011016 GO:0008270
Pste3g01498 361 PANTHER ZINC FINGER, RING-CH-TYPE 22 328 - -
Pste3g01498 361 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 172 IPR013083 -
Pste3g01498 361 SUPERFAMILY RING/U-box 126 165 - -
Pste3g01498 361 ProSiteProfiles Zinc finger RING-CH-type profile. 103 169 IPR011016 GO:0008270
Pste3g01498 361 MobiDBLite consensus disorder prediction 1 18 - -
Pste3g01498 361 Pfam RING-variant domain 128 162 IPR011016 GO:0008270
Pste3g01498 361 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01498 Pste-Chr3 9275062 9279180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01498 1 351 C3H Transcription Factor Family AT5G08750 63.435 4.48e-154 436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01498 3 9275062 9279180 Pste3g01498 3 9275062 9279180 ECH