Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01497 ATGGGAAGGCTATCAATCAGATCTCATAATAAGTGCAAGAATCACAAGGAACCATCATGGGCATTGACAAAGTGTTTTCATCATGGTAGTGGAAGAAATGTGGCTATGGGAATTTCACCAGAATGGAATATTGACTTTTCTAATCTCTTAATAGGGCACAAGTTTTCTCAAGGTGCTCATAGTCAAATTTACTATGGTATATACAAAGAGGAACATGTTGCTTTTAAATTTGTCAAGGTAGGAGGAAATGATCAAAAGGGTGCCCCAATATGTCTTTTGGAGACACAATTTTTGAGAGAAGTCACATTTCTACCTCGCTTACAACATCAAAATGTTGTGAAGTTTGTAGCTGCATACAAAGACACTGATTTTTGTTGCATTCTCACGGAGTATCAACAGAAGGGTTCATTAAGGTTGTTTTTGAAAACGTTAGAGTCCAAGCCAATTTGTCTAAAGAGGATGGTAGGTTTTGCTTTGGAAATTGCTCGTGGAATGGAGTATATACATGCAAAAGGGGTCATTCATAGGGACCTTAAACCAGAGAATGTTCTTGTTGATGGGGACTTTCACCTCAAAATTTCTGATTTTGGCATTGCTTGTGAGGCTTCAAAGTGTGACTCATTGAAGGGTACCTACCGTTGGATGGCACCAGAGATGATCAAAGGCAAACGCTATGGGAGAAAGGTTGATGTGTACAGTTTTGGGCTTGTTTTGTGGGAGCTTGTGAGTGGAAAAGTGCCATTTGAGGACATGAGTCCTATCCAAGTTGCTGTTGCTGTGGCAGATAGGAATTTAAGGCCAGTTGTTCCTTCACATTGCCCTCATATTTTGAGTGATTTGATGAAGCAATGTTGGGACTTGAAACCAGAGAAGAGACCTGATTGA 885 0.4 MGRLSIRSHNKCKNHKEPSWALTKCFHHGSGRNVAMGISPEWNIDFSNLLIGHKFSQGAHSQIYYGIYKEEHVAFKFVKVGGNDQKGAPICLLETQFLREVTFLPRLQHQNVVKFVAAYKDTDFCCILTEYQQKGSLRLFLKTLESKPICLKRMVGFALEIARGMEYIHAKGVIHRDLKPENVLVDGDFHLKISDFGIACEASKCDSLKGTYRWMAPEMIKGKRYGRKVDVYSFGLVLWELVSGKVPFEDMSPIQVAVAVADRNLRPVVPSHCPHILSDLMKQCWDLKPEKRPD 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01497 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Pste3g01497 294 PRINTS Tyrosine kinase catalytic domain signature 273 294 IPR001245 GO:0004672|GO:0006468
Pste3g01497 294 PRINTS Tyrosine kinase catalytic domain signature 167 185 IPR001245 GO:0004672|GO:0006468
Pste3g01497 294 PRINTS Tyrosine kinase catalytic domain signature 229 251 IPR001245 GO:0004672|GO:0006468
Pste3g01497 294 PRINTS Tyrosine kinase catalytic domain signature 129 142 IPR001245 GO:0004672|GO:0006468
Pste3g01497 294 PRINTS Tyrosine kinase catalytic domain signature 210 220 IPR001245 GO:0004672|GO:0006468
Pste3g01497 294 SUPERFAMILY Protein kinase-like (PK-like) 36 294 IPR011009 -
Pste3g01497 294 SMART serkin_6 49 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01497 294 Gene3D Phosphorylase Kinase; domain 1 38 133 - -
Pste3g01497 294 ProSiteProfiles Protein kinase domain profile. 49 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01497 294 Gene3D Transferase(Phosphotransferase) domain 1 134 294 - -
Pste3g01497 294 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 42 293 - -
Pste3g01497 294 CDD STKc_MAP3K-like 57 294 - -
Pste3g01497 294 Pfam Protein tyrosine and serine/threonine kinase 51 294 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01497 Pste-Chr3 9261523 9262810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01497 5 294 MAP Kinase Kinase Kinase AT5G58950 51.536 1.57e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pste3g01497 PK_Tyr_Ser-Thr 4.6e-59 CL0016