Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01494 GGAGAAAGGTGAAAGGTGAAAGGTGAATGGTGATAGGTGAAGAATGATAAATGAATAAATGGTTGGTAGAAGAAGAGAAAGCATTTGAATGTTGGAAGCTTGCAATGGGAGACGGAAGGTGGAGCAGGGCGGAGTGGTTGCAACAGTACGATCTGTTAGGGAAAATCGGCGAAGGCACTTACGGCCTGGTGTTCCTGGCGAGAACCAAATCCCCTCCGTCCAAATCCATCGCCATCAAGAAGTTCAAGCAGTCCAAGGACGGCGACGGCGTCTCCCCCACCGCCATTCGCGAAATCATGTTGCTCAGAGAGATTACGCACGAGAACGTCGTCAAGCTCGTCAATGTCCACATCAACCACGCCGACATGTCTCTCTACCTCGCTTTCGATTACGCCGAGCACGATCTCTATGAAATTATTAGGCATCACAGGGACAAACTCAACCATTCCATTAATCAATACACTGTTAAGTCCTTGCTCTGGCAGTTGCTCAATGGACTAAGCTATCTCCACAGTAATTGGATGATACATCGGGATTTGAAGCCGTCGAATATATTGGTTATGGGCGAAGGAGAGGAACATGGAGTTATTAAGATCGCTGACTTTGGACTTGCAAGGATATATCAAGCTCCTCTGAAGCCGTTATCTGATAATGGGGTTGTTGTAACCATTTGGTATCGTGCACCCGAGTTACTTCTTGGAGCAAAACATTATACCAGTGCAGTTGATATGTGGGCTGTGGGATGCATTTTTGCTGAGTTGTTGACCTTGAAACCACTATTTCAAGGGGCAGAAGTCAAAGCTACATCAAATCCATTCCAGCTTGACCAACTTGACAAGATATTCAAGGTTTTAGCTATATCACAGGACATTGTTACTGTGCCAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCAAGTCTTCCACATTGGCAACAAGACTTGCAACATATACAAGGACACAAATATGACAACACCGGACTCTATAATGTTGTACACCTATCTCCAAAAAGTCCTGCATATGACCTCTTGTCAAAGATGCTTGATGCACTTGTACCCTGCCAACTTGGTGAGAAAATTGTAAATTACCCTACTCGTCCAGTGGACTCCTCAACTGATCTTGAAGGGACAAACAATCTGCAACATTCACTAACGGTAACTGCAGTTTCTGGCAACATGCCTGGTGCTCATGGGTCAAATAGATCTGTGCCTCGGCCAATGAATGTTAATGGAATGCAAAGAATGCCACCTCAGGCAATGGCCGTTTATAATCTCACATCTCAGGCAGCCATGGGAGATGGAATGAACTCTGGGGGTATCTCGAAGCAACGAGGTGTTCCACAGGCCCATCAGCCGCAACAGGAAAGAGCAAATGGGGATGCCAGGATATCCTGCACAGCAGAAGTCAAGACGATTATAAGGTTTTCTGCTGGAAGAGAGACCTCGGGAAGGTAGATTTGGGGGTCAATACTTCAATACCTGAACTCATGCAGGACATTTCTGGACAGAGTATGCCTTCAATAGTCAATACTTGCAGTCCTCACTATTGCATTCAACGATTGGGTGAATTCTTCACTGGAATTTTGACAGCTAAAATGCCAAGTATATGCTGGAACACCAATGGAAGCCATGAAAGGGAATAAACGTATGAAACGGTTAAGCTACTGTAAGCGCATGATTGTATATCATGATTATAACAACGCAATTCTCTTGTATTTCTCTGCGTTTGGGCAAGATCTATGTCAGAAAACCAAATGTTGAACATCAATTGGGTTTTCATAATGGAACTTTTCATGATTAAATCCATAATATGCTAATACGGTGTATTAATTTGTAGAATATTTTGC 1849 0.4408 MNKWLVEEEKAFECWKLAMGDGRWSRAEWLQQYDLLGKIGEGTYGLVFLARTKSPPSKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKLNHSINQYTVKSLLWQLLNGLSYLHSNWMIHRDLKPSNILVMGEGEEHGVIKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATSNPFQLDQLDKIFKVLAISQDIVTVPGHPTLEKWPSLASLPHWQQDLQHIQGHKYDNTGLYNVVHLSPKSPAYDLLSKMLDALVPCQLGEKIVNYPTRPVDSSTDLEGTNNLQHSLTVTAVSGNMPGAHGSNRSVPRPMNVNGMQRMPPQAMAVYNLTSQAAMGDGMNSGGISKQRGVPQAHQPQQERANGDARISCTAEVKTIIRFSAGRETSGR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01494 468 FunFam Putative cyclin-dependent kinase E-1 115 339 - -
Pste3g01494 468 CDD STKc_CDK8_like 32 332 - -
Pste3g01494 468 Gene3D Phosphorylase Kinase; domain 1 21 113 - -
Pste3g01494 468 ProSiteProfiles Protein kinase domain profile. 33 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01494 468 PANTHER CELL DIVISION PROTEIN KINASE 31 333 - -
Pste3g01494 468 Gene3D Transferase(Phosphotransferase) domain 1 114 335 - -
Pste3g01494 468 SMART serkin_6 33 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01494 468 ProSitePatterns Protein kinases ATP-binding region signature. 39 64 IPR017441 GO:0005524
Pste3g01494 468 MobiDBLite consensus disorder prediction 420 445 - -
Pste3g01494 468 SUPERFAMILY Protein kinase-like (PK-like) 28 332 IPR011009 -
Pste3g01494 468 Pfam Protein kinase domain 33 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01494 468 MobiDBLite consensus disorder prediction 425 444 - -
Pste3g01494 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01494 Pste-Chr3 9249715 9261624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01494 26 440 Core Cell Cycle Gene Families AT5G63610 70.246 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Pste3g01494 Pkinase 3.9e-58 CL0016