Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste3g01482 | ATGGCACCAAAGAAGCCAAGAACCGTGTCAAGAAACCCTGATTTGATTAGGGGAATTGGGAAGTACTCGAGGTCGCAGATGTACCACAAGAAGGGAATCTGGGCCATCAAGGCCAAAAACGGCGGCGTTTTCCCTCGCCACGATCCCAAGCCCAAGCCCGAGGCACCGGCGGAGAAGGCACCAAAGTTTTACCCCGCTGATGATGTGAAGAAGCCCCTTGTCAACAAGCACAAGCCCAAACCCGCGAAACTCAGGGCTAGCATTACTCCAGGGACTGTATTGATCCTGCTTGCTGGGAGGTTCAAGGGAAAGAGGGTTGTTTTCTTGAAACAGCTTCCATCTGGATTGCTTCTTGTAACAGGTCCCTTTAAGATCAATGGGGTTCCTCTCAGAAGGGTGAACCAATCATATGTCATTGGTACATCCACAAAAGTTGACATCTCTGGTGTTAATGTTGATAAATTTGATGACAAGTACTTTGCCAAGGAAGCCAAGAAAAAGAAAACAAAGGGAGAAGGAGAGTTCTTTGAGGCAGAGAAAGAGGAGAAAAATGTGCTTCCCCAAGAGAAGAAAGATGACCAAAAAACTGTGGACACTGCTTTGTTAAAGGCCATAGAGAGTGTTCCTGACTTGAAGTCTTACTTGGGTGCTAGGTTTTCTTTGAAGGCAGGAATGAAGCCTCATGAGCTAGTCTTCTAG | 699 | 0.4692 | MAPKKPRTVSRNPDLIRGIGKYSRSQMYHKKGIWAIKAKNGGVFPRHDPKPKPEAPAEKAPKFYPADDVKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEAKKKKTKGEGEFFEAEKEEKNVLPQEKKDDQKTVDTALLKAIESVPDLKSYLGARFSLKAGMKPHELVF | 232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste3g01482 | 232 | MobiDBLite | consensus disorder prediction | 43 | 62 | - | - | |
Pste3g01482 | 232 | FunFam | 60S ribosomal protein L6 | 86 | 170 | - | - | |
Pste3g01482 | 232 | Gene3D | - | 86 | 170 | IPR014722 | - | |
Pste3g01482 | 232 | Pfam | Ribosomal protein L6, N-terminal domain | 4 | 59 | IPR005568 | GO:0003735|GO:0005840|GO:0006412 | |
Pste3g01482 | 232 | CDD | KOW_RPL6 | 80 | 232 | IPR041997 | - | |
Pste3g01482 | 232 | PANTHER | 60S RIBOSOMAL PROTEIN L6 | 1 | 232 | IPR000915 | GO:0003735|GO:0005840|GO:0006412 | |
Pste3g01482 | 232 | SUPERFAMILY | Translation proteins SH3-like domain | 86 | 172 | IPR008991 | - | |
Pste3g01482 | 232 | Pfam | Ribosomal protein L6e | 125 | 232 | IPR000915 | GO:0003735|GO:0005840|GO:0006412 | |
Pste3g01482 | 232 | MobiDBLite | consensus disorder prediction | 42 | 62 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste3g01482 | Pste-Chr3 | 9185051 | 9187468 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste3g01482 | 3 | 232 | Cytoplasmic Ribosomal Protein Gene Family | AT1G74060 | 82.328 | 1.14e-122 | 346 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste3g01482 | 3 | 9185051 | 9187468 | Pste3g01482 | 3 | 9185051 | 9187468 | ECH |