LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste3g01482	ATGGCACCAAAGAAGCCAAGAACCGTGTCAAGAAACCCTGATTTGATTAGGGGAATTGGGAAGTACTCGAGGTCGCAGATGTACCACAAGAAGGGAATCTGGGCCATCAAGGCCAAAAACGGCGGCGTTTTCCCTCGCCACGATCCCAAGCCCAAGCCCGAGGCACCGGCGGAGAAGGCACCAAAGTTTTACCCCGCTGATGATGTGAAGAAGCCCCTTGTCAACAAGCACAAGCCCAAACCCGCGAAACTCAGGGCTAGCATTACTCCAGGGACTGTATTGATCCTGCTTGCTGGGAGGTTCAAGGGAAAGAGGGTTGTTTTCTTGAAACAGCTTCCATCTGGATTGCTTCTTGTAACAGGTCCCTTTAAGATCAATGGGGTTCCTCTCAGAAGGGTGAACCAATCATATGTCATTGGTACATCCACAAAAGTTGACATCTCTGGTGTTAATGTTGATAAATTTGATGACAAGTACTTTGCCAAGGAAGCCAAGAAAAAGAAAACAAAGGGAGAAGGAGAGTTCTTTGAGGCAGAGAAAGAGGAGAAAAATGTGCTTCCCCAAGAGAAGAAAGATGACCAAAAAACTGTGGACACTGCTTTGTTAAAGGCCATAGAGAGTGTTCCTGACTTGAAGTCTTACTTGGGTGCTAGGTTTTCTTTGAAGGCAGGAATGAAGCCTCATGAGCTAGTCTTCTAG	699	0.4692	MAPKKPRTVSRNPDLIRGIGKYSRSQMYHKKGIWAIKAKNGGVFPRHDPKPKPEAPAEKAPKFYPADDVKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEAKKKKTKGEGEFFEAEKEEKNVLPQEKKDDQKTVDTALLKAIESVPDLKSYLGARFSLKAGMKPHELVF	232

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste3g01482	232	MobiDBLite	consensus disorder prediction	43	62	-	-
	Pste3g01482	232	FunFam	60S ribosomal protein L6	86	170	-	-
	Pste3g01482	232	Gene3D	-	86	170	IPR014722	-
	Pste3g01482	232	Pfam	Ribosomal protein L6, N-terminal domain	4	59	IPR005568	GO:0003735\|GO:0005840\|GO:0006412
	Pste3g01482	232	CDD	KOW_RPL6	80	232	IPR041997	-
	Pste3g01482	232	PANTHER	60S RIBOSOMAL PROTEIN L6	1	232	IPR000915	GO:0003735\|GO:0005840\|GO:0006412
	Pste3g01482	232	SUPERFAMILY	Translation proteins SH3-like domain	86	172	IPR008991	-
	Pste3g01482	232	Pfam	Ribosomal protein L6e	125	232	IPR000915	GO:0003735\|GO:0005840\|GO:0006412
	Pste3g01482	232	MobiDBLite	consensus disorder prediction	42	62	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste3g01482	Pste-Chr3	9185051	9187468	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste3g01482	3	232	Cytoplasmic Ribosomal Protein Gene Family	AT1G74060	82.328	1.14e-122	346

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste3g01482	3	9185051	9187468	Pste3g01482	3	9185051	9187468	ECH

Showing 1 to 1 of 1 entries