Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01475 GCAGACAACATAAACTAAAAAAAAGAAAAAACCCCTCTTTTTGTCGCCAGCAAGTCGCAACTAGAACCTTCCACTTGCTCCAAACATTAGGGTTTTTGGAAGGGGTTTTAGGGCTTTTTCTCGGAACCAGAAACCCCAATTCTCCTTCCAAAGCTTCATTTCTCATTGACAGAGCTTCCAAATGCTTCGCTCCAATGGCGTTAGGCTCATTCGATCGCTGCCCCAAAAGCTCCTCCGTCAAGTCGACGAACCCATTTTTGAAGGAGCGTGCCAAAGGGGTTACAGGACATTGAATTCAGGACTTTGTAATCCGTCCAGAGTAATCGGGAATTTTTCTCCAAATGTTGGAGATGGTGTTAATTTGAAGAACCGGTTGCTATTTGGAGCAGCAAATACGTATTTGGGGACATCTAGAGCCATTCATGGGTCAGCATCATTGGCAAGAAACTATTATGATGTTCTTGGCGTGAGTAAGAATGCAAGTTCGTCTGAAATAAAGAAAGCATATTATGGGCTTGCAAAGAAGCTCCATCCAGACACAAACAAAGACGATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTTCAGTGGCATATGAGGTTTTGAAGGATGAGGAAAAACGTCAACAGTATGATCAGATTGGCCATGATGCATATGTAAACCAAGAAAGCACTGGTTTTGGAGGCAACAGTGGCTTTAATCCATTTGAGCAGATATTCCGTGATCATAATATTGGTGGAGAAGATGTCAAGACTTTCATTGAACTATCCTTTATGGAAGCTGTCCGGGGATGCAACAAAACTATTACATTTCAAACAGAAGTGCTTTGTAACACTTGTGGTGGGAGTGGTGTTCCTCCTGGTACAAGACCTGAAACCTGTAAGCGCTGTAAAGGGTCAGGAGTGACATTTGTACAAACTGGCATATTTAGAATGGAGAGTACTTGCGGTACATGTAAGGGAACTGGCAAAATTGTATCGAATTTCTGCAAGTCATGCAAAGGTGCAAAGGTTATCAAAGGAACAAAATCAGTCAAATTGGATATTATGGCTGGTATTGACAACAATGAAACTATAAAGGTTTATAGAAGTGGTGGTGCAGATCCTGATGGAGATAACCCTGGTGATCTTTATGTTACTATCAAAGTCCGGGAAGATCCTGTTTTCCGTAGAGAAGGATCTGATATTCATGTAGATGCTGTCTTAAGCATCACTCAGGCAATTTTGGGTGGAACCATTCAGGTTCCAACTCTTACCGGAGATGTTGTTCTCAAGGTTCGTCCTGGCACCCAACCTGGTCAGAAGGTGGTTCTAAAAAAGAAAGGGATCAAGACAAAAAATTCTTACACATTTGGTGATCAATACGTTCATTTCAATGTCAGCATTCCAAAAAGGCAATCTCCTCGTGCTCCTCTAGGCTATTATTCCAGTCACTGCTGTATTGTATATAATTTCCTTATAGCATAA 1465 0.4157 MLRSNGVRLIRSLPQKLLRQVDEPIFEGACQRGYRTLNSGLCNPSRVIGNFSPNVGDGVNLKNRLLFGAANTYLGTSRAIHGSASLARNYYDVLGVSKNASSSEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSVAYEVLKDEEKRQQYDQIGHDAYVNQESTGFGGNSGFNPFEQIFRDHNIGGEDVKTFIELSFMEAVRGCNKTITFQTEVLCNTCGGSGVPPGTRPETCKRCKGSGVTFVQTGIFRMESTCGTCKGTGKIVSNFCKSCKGAKVIKGTKSVKLDIMAGIDNNETIKVYRSGGADPDGDNPGDLYVTIKVREDPVFRREGSDIHVDAVLSITQAILGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKKKGIKTKNSYTFGDQYVHFNVSIPKRQSPRAPLGYYSSHCCIVYNFLIA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01475 427 Pfam DnaJ domain 89 151 IPR001623 -
Pste3g01475 427 FunFam Chaperone protein dnaJ 1, mitochondrial 323 410 - -
Pste3g01475 427 Gene3D - 216 276 - -
Pste3g01475 427 SMART dnaj_3 88 146 IPR001623 -
Pste3g01475 427 FunFam Chaperone protein dnaJ GFA2, mitochondrial 86 202 - -
Pste3g01475 427 CDD DnaJ_zf 216 276 IPR001305 GO:0031072|GO:0051082
Pste3g01475 427 ProSitePatterns Nt-dnaJ domain signature. 131 150 IPR018253 -
Pste3g01475 427 Gene3D DnaJ domain 86 189 IPR036869 -
Pste3g01475 427 Hamap Chaperone protein DnaJ [dnaJ]. 86 424 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pste3g01475 427 ProSiteProfiles Zinc finger CR-type profile. 203 281 IPR001305 GO:0031072|GO:0051082
Pste3g01475 427 SUPERFAMILY HSP40/DnaJ peptide-binding domain 186 324 IPR008971 GO:0006457|GO:0051082
Pste3g01475 427 SUPERFAMILY Chaperone J-domain 88 184 IPR036869 -
Pste3g01475 427 CDD DnaJ_C 187 404 - -
Pste3g01475 427 Gene3D - 324 413 - -
Pste3g01475 427 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 203 278 IPR036410 -
Pste3g01475 427 PRINTS DnaJ domain signature 146 165 IPR001623 -
Pste3g01475 427 PRINTS DnaJ domain signature 126 146 IPR001623 -
Pste3g01475 427 PRINTS DnaJ domain signature 109 124 IPR001623 -
Pste3g01475 427 PRINTS DnaJ domain signature 91 109 IPR001623 -
Pste3g01475 427 FunFam Molecular chaperone DnaJ 208 281 - -
Pste3g01475 427 CDD DnaJ 89 143 IPR001623 -
Pste3g01475 427 Gene3D - 190 318 - -
Pste3g01475 427 Pfam DnaJ C terminal domain 192 402 IPR002939 -
Pste3g01475 427 SUPERFAMILY HSP40/DnaJ peptide-binding domain 327 407 IPR008971 GO:0006457|GO:0051082
Pste3g01475 427 ProSiteProfiles dnaJ domain profile. 89 154 IPR001623 -
Pste3g01475 427 Pfam DnaJ central domain 216 276 IPR001305 GO:0031072|GO:0051082
Pste3g01475 427 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 55 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01475 Pste-Chr3 9136833 9146902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01475 82 151 C2H2 Transcription Factor Family AT1G74250 42.667 4.77e-08 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01475 3 9136833 9146902 Pste3g01475 3 9136833 9146902 ECH