Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01469 ATGTCTTTGATATCATACCGTGATCTGGTTGGTGTTGCTTATACAGAAGATGAGGTGAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGTCCTAATGATGAGGGTGAGATGTTTAACCGCCCTGGTAAACTCAGTGACCGCTTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTGATTACTAAAGCTCGTCACAATGGTCAGAATTATGTGTTTGCACTTCTAACTGGTTATCGTGACCCTCCTGCTGGTGTTTCGATTAGAGAAGGACTGCACTACAACCCTTATTTTCCTGGTGGGGCCATTGCTATGCCTAAAATGCTTAATGATGGTGCTGTTGAATATGAAGATGGTACCCCTGCTACCGAAGCTCAGATGGGTAAGGATGTTGTGTCATTCCTGAGTTGGGCTGCAGAACCCGAGATGGAAGAGAGAAAACTGATGGGATTTAAATGGATATTTGTTCTATCACTGGCATTACTTCAAGCTGCCTACTACCGTCGCCTAAGGTGGTCTGTTATAAAGTCTCGCAAGCTGGTTCTTGATGTTGTCAACTAGCTCCCTTCAAGTTTCATTTTTCACACCAGGAAAGGTTATTGTTGTTGGCAATAATTTTGTCAGATGCTCAAGTTGTTTGATCCTGTCAAATTAATTGATGGAATAACTGAAGCATGTTCTATTTTTGTTTAGCATATAGAAATAATCCTGATTTATGTATGTGAGATGTAGTTACATTCCCTTTTTCTCCCTTCTCAGACCTATATGTATTGTTACATTCTCCAGGACCCTTGTACTCTTATTTTTCTTCAATCTGGATTACGGTGATTGACCTGCGATTGGAGTTTATTTTTGTTCTTACAAGAAAAAGAGACTGCCAAAATGCTCCTTTCTTTTCTTAATTGCTACTTTACTTAGTTGCCACTGTTATTATACCAAG 979 0.4086 MSLISYRDLVGVAYTEDEVKAMAAEIEVVDGPNDEGEMFNRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVIKSRKLVLDVVN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01469 199 Pfam Cytochrome C1 family 1 186 IPR002326 GO:0009055|GO:0020037
Pste3g01469 199 SUPERFAMILY Cytochrome c 1 153 IPR036909 GO:0009055|GO:0020037
Pste3g01469 199 Gene3D - 155 198 - -
Pste3g01469 199 FunFam Cytochrome c1, heme protein 1 154 - -
Pste3g01469 199 PRINTS Cytochrome C1 signature 33 53 IPR002326 GO:0009055|GO:0020037
Pste3g01469 199 PRINTS Cytochrome C1 signature 135 154 IPR002326 GO:0009055|GO:0020037
Pste3g01469 199 PRINTS Cytochrome C1 signature 154 169 IPR002326 GO:0009055|GO:0020037
Pste3g01469 199 PRINTS Cytochrome C1 signature 104 115 IPR002326 GO:0009055|GO:0020037
Pste3g01469 199 PRINTS Cytochrome C1 signature 66 90 IPR002326 GO:0009055|GO:0020037
Pste3g01469 199 PRINTS Cytochrome C1 signature 115 134 IPR002326 GO:0009055|GO:0020037
Pste3g01469 199 PANTHER CYTOCHROME C1 1 197 IPR002326 GO:0009055|GO:0020037
Pste3g01469 199 FunFam Cytochrome c1, heme protein, mitochondrial 155 199 - -
Pste3g01469 199 Gene3D - 1 154 IPR036909 GO:0009055|GO:0020037
Pste3g01469 199 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 154 198 IPR021157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01469 Pste-Chr3 9111765 9113913 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01469 1 199 Chloroplast and Mitochondria Gene Families AT5G40810 93.467 2.54e-124 350