Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01462 GCTTCGTCTGTTCCTCTCGCACAAGGGAGAAGCCGCCTCAGCCACTGACTGCTTCGTGGGTTTCTCTTTCGCTCTGTGAAAAAACCTCAAAAACCTTTTCTTCTCAAAACCTTCTAAAACCCCTTTCCCTATTTCTTTCTATGCATCTTCTTCTTATTATCTAATAATCCATATTTCACTTTCAATTGCTCTCACTCTTGTTCTTGCTGAAGGAGGAAATGGCTGGAAGAAAGAGTAAGAGGGGCATAAAAGGGTCTCATAATACGACTGCAGCTTCGGAACCTGCAAACCTTTCTGACATTCCTGTGAAGGATAATGTGGAAGTTGCTTCTGAATCTGTAAAAGCTGATGCAGCTGAAGTTGCGGCTGCTGGTGATTCCGCCGGTGCTGATCCTGTGGTGAAGGAGAATGAAACAGCAACTGAAGGGAGTCAACAAAAGCAAGGTGATCTTCAACTTTACCCAGTTTCTGTTAAAACTCAAACTGGGGAGAAGCTTGAGCTTCAGTTGAACCCTGGAGACTCTGTCATGGATGTAAGACAATTCCTTCTTGATGCTCCTGAGACATGTTTCATTACATGCTATGATTTACTGTTGCATACTAAGGATGGAACCATTCATCACTTAGAAGATTATAATGAAATTTCCGAAGTAGCTGATATTACTACTGGTGGCTGCTCCTTGGAAATGGTTCCTGCATTTTATGATGATCGATCTATAAGGGCTCATGTTCACCGTACAAGGGAGTTGCTTTCCCTTTCTAACCTCCATGCTTCAATATCAACATCACTTGCCCTACAAAATGAGGTAGCACAAAATAAAGCTGCAAATTCAGGAGATACCTCGAAACCTGACGTTCCTGAGCTTGATGGGCTTGGTTATATGGAGGACATCTCTGGTTCTTTGGGTAATTTATTGTCGTCCCCATTGAAGGATATTAAATGTGTAGAGAGCATAGTGTTTTCATCCTTCAATCCTCCTCCGAGCTATAGAAGGCTTGTTGGAGATTTGATTTATTTGGATGTGGTCACTCTTGAGGGTAATAAATTTTGTATTACGGGGAGTACGAAAATTTTTTATGTCAACTCAAGCTCTGCAAACTCTCTTGATCCAAGGCCAAGTAAAGCTACTTTTGAGGCTACAACACTTGTTGCTCTCTTACAGAAGATTAGCCCCAAGTTCAAAAAAGCTTTTCGTGAAGTATTGGAGGGTAGAGCTGCTGCCCATCCTTTTGAAAATGTGCAATCTTTGTTGCCGCCTAATTCCTGGGTTGGGTTATACCCTGTTCCTGACCACAGACACGATGCAGCCAGGGCTGAGAATGCTTTGACTCTTCTTTATGGAAATGAGCCGATTGGCATGCAAAGAGATTGGAATGAAGAGCTGCAGTCTTGTAGAGAATTTCCTCATACAACTCCACAGGAGAGGTATGTTCACAACAATATATTCTTTAGTTTTGCTATTGATGCTGACCTTGAGAAGCTGTCAAAGAAACGTGTGGATGCTAATTCCAAAACATGGAGCTCAGGCAATTTACAAAATTCTTCTGATAAAGCTTCTATTCCACTTCATGGAGAGAGTCAGGTTCCTAATGGGGGAAAAGATGATGCTTTACCTTCAGAAGATCTTAATGGCACAGAAGTCACTCAAGATGTTTCTCCAGAAGCTCAGCTGGCTGAGAATGAGCAAGCCACATATGCTTCTGCTAACAATGATTTGAAGGGCACAAAGGCTTATCAAGAAGCTGATGTTCCTGGACTTTATAATCTTGCTATGGCTATAATTGATTACAGGGGTCATAGAGTGGTAGCTCAGAGTGTCTTGCCTGGCATTCTTCAAGGGGACAAGTCAGACTCTCTCTTGTATGGCTCAGTTGACAATGGAAAGAAAATTTGCTGGAATGAAGATTTTCATTCTAAGGTGTCAGAGGCTGCCAAACGCCTTCATTTGAAGGAACATTTAGTCCTTGATGGATCTGGAAATGTTTTCAAATTAGCTGCACCAGTGGAATGCAAGGGCATTGTTGGTGGTGATGACCGACATTATCTTCTTGATTTGTTGAGGGTAACTCCTCGTGATGCCAATTATACTGGACCTGGTTCTCGATTTTGTATCTTGAGACCAGAATTAATAACTGCCTTTTGCCAGGCCCAAGCAGCAGAGAAATTGAAATCTAAGGAGAAGAATTCTGAAGAGGCACAAAATTTGGTCAGTGCTTCTGAAAATGCTGACGATGCTGAGCAGTTGGCTAAGGATTCCCAAAATGCTACTGATGCTGACCAGTCAGTAAATGATTCCCAAAATGCTACTGATGCTGACAAGCTGGATGCAGCAAAGGAAGAAAAAACTGAGGATGTAAAAAAAATTGCATCTGTGACTGCCAAAGCCTCTGATGGTTCTGAGGATATTGTTTTTAATCCTAATGTCTTCACTGAATTCAAACTTGCTGGGAGTGCAGAGGAAATAGCAGCGGACAAAGATAATGTTAGAAAAGTTAGTCAATATCTTACTGATGTTGTACTTCCAAAGTTTATACAAGACCTGTGTACACTTGAAGTTTCACCAATGGATGGCCAGACATTAACTGAAGCACTGCACGCTCATGGAATTAATGTTCGCTATATTGGCAAAGTTGCTGGAGGAACTAAACATTTACCTCATCTGTGGGATCTTTGTAATAACGAGATTGTAGTCCGATCTGCCAAGCATGTTTTCAAGAATGATATGAATCTTGATTTAATTCATGCAATTCAATCTAATTCAGCCAGGGAGATTCAGATAATGCACCACCTGTTGGAGCACCCCAACATGATCTGGATCCACTGCACCTACAAGGATGCCACCTTCGTCCACCTTGTCATGGAGCTCTGCGAGGGCAGGGAACTCTTCAATAGGATTGTTCAGAAGGGCCACTACAATGAGCACCAGGCTGCCAAGCTCAACAAGACCATTCTTGAGGACTTGTTGAGAGAGACAGAGGATCATGATCTTGCACCAGCAGTATCTCATTTCTTAAACTGCCTCTTTGGAAGTTGTCAAGCTCCCAGTGGAAAAGTTATTGCTAATAGCACACAGTCCAAAACTCCTAAAAAGGCATCTTTTAAGTTCCAGTTTAATCAGTATTCCTGGCTATTTAATTTACAGGAACATGCAGGACAAAGGTCTCCTGGAAAGCATTCAAAAGGCCAAGCTCGATGGAAAGGCAGGGCATCTTTAAGAAAGACTCAACCTTTGTATATGAGTATCAGCTCAGATGCTCTTTGGTCAGACATTCAAGAATTTGCGATGGTTAAATATAAGTTTGAATTGCCTGACGATGCAAGGTCACGGGTTAAGAAAATTTCTGTTATACGTAATCTCTGTCTGAAGGTTGGTATAACCGTTGCAGCTCGTAAATATGATCTTAGTTCTGCAACACCCTTCCAAACAACTGATGTCATGGATCTTCGTCCGGTCGTCAAGCATTCAGTTCCTGCCTGTTCAGAAGCCAAGGAGCTTGTGGAAACTGGAAAACTTCAATTGGCTGAGGGCATGCTAAGTGAAGCCTATACATTATTTTCAGAGGCATTCTCAATTCTACAACAGGTTACTGGTCCAATGCATCGGGAGGTTGCTAATTGCTGTCGGTATCTTGCCATGGTTTTATACCATGCTGGAGATATGGCTGGGGCTATCATGCAACAACATAAGGAACTAATTATTAATGAACGTTGTCTTGGTCTAGATCATCCTGACACTGCTCACAGGCATTTCCCATTCTATTCATCTATTTGTTATGGAAATATGGCCCTGTTCTACCATGGACTTAACCAGACAGAACTTGCCCTTCGGCATATGTCTCGTGCTCTGCTATTATTGAGTTTGTCATCAGGGCCAGATCATCCTGATGTTGCAGCAACATTTATTAATGTTGCAATGATGTATCAGGATATAGGAAAGATGAATACTGCTCTTCGCTATCTGCAAGAAGCTTTAAAGAAGAATGAAAGGCTTCTTGGCGAGGAACATATTCAAACTGCTGTTTGTTATCATGCTCTTGCTATTGCATTTAATTGTATGGGTGCTTTCAAGCTCTCGCATCAGCATGAGAAGAAAACATACGATATACTTGTTAAACAACTTGGTGAAGATGATTCAAGGACACGGGATTCACAAAATTGGATGAACACATTTAAGATGCGTGAGCTACAGATGAATGCCCAAAAGCAAAAGGGTCAAGCCCTGAATGCAGCTTCAGCTCAGAAGGCTATTGATATCTTGAAGGCACATCCTGATTTGATGCATGCATTCCAAGCCGCTGCAGTTGCTGGGGGATCTGGAAATTCAGGTGCATCTGCAAACAAATCCCTCAATGCTGCAATAATGGGTGAGGCCCTCCCCAGAGGAAGGGGAATTGATGAAAGGGCAGCACGTGCAGCCGCCGAAGTCAGGAAAAAGGCTGCTGCAAGGGGCCTGCTAGTACGCCCTCACGGTGTACCGGTTCAAGCATTGCCACCCCTTACCCAACTTTTGAACATTATAAACTCAGGTGTGACTCCAGATGCTGCCACCACGGACAATGGAAATGCAAATGGAGCAAAGAAGGAAGCAAATGGCATTCCTTCAAGTGATCCAACTGATACCAAGAAAGGCCAAACAATGCCTGTGCAAGAACAAGCTGCCCCAGTTGGATTAGGCAAGGGGTTGTCATCATTGGATGCTAAGAAACAAAAATCGAAACCGAAGGCTGGGGCTTGAAATTTTGGAACTTGTAAGCTCTGGCAGTTGTTGGCAATGCTAGATTTATTTGAGATCAAACATTCTTTTTTGAGATGGTTGGATTGATCAGGTACTGTGCTCAGTTTTTTTTCCTGAAGAGTGCTGTAGCAATCACAAGTATTTTTGCTTTTTTCGTCCTTTCTCTGTAGCTTTGGTAGATTTTAACATTCGGAGTGAATGCATGGTGATAAAGTGCATTACTTTTATTTCTTCTTGCTAATTACTGATAGTCTTTCAGTAAACTATATGTCTGGGAATATAGGGCAATAACTAGCATTTTGATGATGAATCCCTTGTATCTGTAACAAATTTAATTGACATTCTTATCATTAATAAAAATGATGGCAATGTTCTCTCCGAA 5118 0.4205 MAGRKSKRGIKGSHNTTAASEPANLSDIPVKDNVEVASESVKADAAEVAAAGDSAGADPVVKENETATEGSQQKQGDLQLYPVSVKTQTGEKLELQLNPGDSVMDVRQFLLDAPETCFITCYDLLLHTKDGTIHHLEDYNEISEVADITTGGCSLEMVPAFYDDRSIRAHVHRTRELLSLSNLHASISTSLALQNEVAQNKAANSGDTSKPDVPELDGLGYMEDISGSLGNLLSSPLKDIKCVESIVFSSFNPPPSYRRLVGDLIYLDVVTLEGNKFCITGSTKIFYVNSSSANSLDPRPSKATFEATTLVALLQKISPKFKKAFREVLEGRAAAHPFENVQSLLPPNSWVGLYPVPDHRHDAARAENALTLLYGNEPIGMQRDWNEELQSCREFPHTTPQERYVHNNIFFSFAIDADLEKLSKKRVDANSKTWSSGNLQNSSDKASIPLHGESQVPNGGKDDALPSEDLNGTEVTQDVSPEAQLAENEQATYASANNDLKGTKAYQEADVPGLYNLAMAIIDYRGHRVVAQSVLPGILQGDKSDSLLYGSVDNGKKICWNEDFHSKVSEAAKRLHLKEHLVLDGSGNVFKLAAPVECKGIVGGDDRHYLLDLLRVTPRDANYTGPGSRFCILRPELITAFCQAQAAEKLKSKEKNSEEAQNLVSASENADDAEQLAKDSQNATDADQSVNDSQNATDADKLDAAKEEKTEDVKKIASVTAKASDGSEDIVFNPNVFTEFKLAGSAEEIAADKDNVRKVSQYLTDVVLPKFIQDLCTLEVSPMDGQTLTEALHAHGINVRYIGKVAGGTKHLPHLWDLCNNEIVVRSAKHVFKNDMNLDLIHAIQSNSAREIQIMHHLLEHPNMIWIHCTYKDATFVHLVMELCEGRELFNRIVQKGHYNEHQAAKLNKTILEDLLRETEDHDLAPAVSHFLNCLFGSCQAPSGKVIANSTQSKTPKKASFKFQFNQYSWLFNLQEHAGQRSPGKHSKGQARWKGRASLRKTQPLYMSISSDALWSDIQEFAMVKYKFELPDDARSRVKKISVIRNLCLKVGITVAARKYDLSSATPFQTTDVMDLRPVVKHSVPACSEAKELVETGKLQLAEGMLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGDMAGAIMQQHKELIINERCLGLDHPDTAHRHFPFYSSICYGNMALFYHGLNQTELALRHMSRALLLLSLSSGPDHPDVAATFINVAMMYQDIGKMNTALRYLQEALKKNERLLGEEHIQTAVCYHALAIAFNCMGAFKLSHQHEKKTYDILVKQLGEDDSRTRDSQNWMNTFKMRELQMNAQKQKGQALNAASAQKAIDILKAHPDLMHAFQAAAVAGGSGNSGASANKSLNAAIMGEALPRGRGIDERAARAAAEVRKKAAARGLLVRPHGVPVQALPPLTQLLNIINSGVTPDAATTDNGNANGAKKEANGIPSSDPTDTKKGQTMPVQEQAAPVGLGKGLSSLDAKKQKSKPKAGA 1505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01462 1505 Gene3D Transferase(Phosphotransferase) domain 1 845 914 - -
Pste3g01462 1505 SUPERFAMILY Protein kinase-like (PK-like) 845 912 IPR011009 -
Pste3g01462 1505 FunFam Clustered mitochondria protein homolog 1081 1370 - -
Pste3g01462 1505 CDD CLU-central 782 1062 IPR033646 -
Pste3g01462 1505 SUPERFAMILY Hypothetical protein c14orf129, hspc210 208 341 IPR023231 -
Pste3g01462 1505 ProSiteProfiles TPR repeat profile. 1225 1258 IPR019734 GO:0005515
Pste3g01462 1505 MobiDBLite consensus disorder prediction 1 77 - -
Pste3g01462 1505 Pfam Mitochondrial function, CLU-N-term 101 178 IPR028275 -
Pste3g01462 1505 MobiDBLite consensus disorder prediction 430 478 - -
Pste3g01462 1505 Coils Coil 643 683 - -
Pste3g01462 1505 MobiDBLite consensus disorder prediction 430 449 - -
Pste3g01462 1505 SUPERFAMILY TPR-like 1091 1210 IPR011990 GO:0005515
Pste3g01462 1505 SMART tpr_5 1090 1123 IPR019734 GO:0005515
Pste3g01462 1505 SMART tpr_5 1225 1258 IPR019734 GO:0005515
Pste3g01462 1505 SMART tpr_5 1183 1216 IPR019734 GO:0005515
Pste3g01462 1505 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 909 1482 IPR027523 GO:0006996
Pste3g01462 1505 MobiDBLite consensus disorder prediction 1461 1475 - -
Pste3g01462 1505 Pfam GSKIP domain 263 330 IPR007967 -
Pste3g01462 1505 Pfam Protein kinase domain 845 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01462 1505 Gene3D Tetratricopeptide repeat domain 1081 1362 IPR011990 GO:0005515
Pste3g01462 1505 ProSiteProfiles Clueless (Clu) domain profile. 357 624 IPR025697 -
Pste3g01462 1505 Pfam Clustered mitochondria 402 623 IPR025697 -
Pste3g01462 1505 MobiDBLite consensus disorder prediction 1442 1505 - -
Pste3g01462 1505 FunFam Clustered mitochondria protein homolog 241 336 - -
Pste3g01462 1505 MobiDBLite consensus disorder prediction 676 698 - -
Pste3g01462 1505 Gene3D Phosphorylase Kinase; domain 1 866 883 - -
Pste3g01462 1505 Pfam Tetratricopeptide repeat 1186 1253 - -
Pste3g01462 1505 SUPERFAMILY TPR-like 1184 1296 IPR011990 GO:0005515
Pste3g01462 1505 Pfam Translation initiation factor eIF3 subunit 135 907 1061 IPR033646 -
Pste3g01462 1505 Pfam Translation initiation factor eIF3 subunit 135 780 837 IPR033646 -
Pste3g01462 1505 Gene3D Hypothetical protein (hspc210) 238 336 IPR023231 -
Pste3g01462 1505 MobiDBLite consensus disorder prediction 651 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01462 Pste-Chr3 9088924 9107337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01462 850 912 EF-hand Containing Proteins AT1G35670 68.254 9.42e-22 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste3g01462 CLU 4.1e-56 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01462 3 9088924 9107337 Pste3g01462 3 9088924 9107337 ECH