Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01460 CTTTTGTCTTCATTCTCATATTTTCACTGTTCTGTTCTGCTGCCACTGCCACTCCGATCTCTTAATTATGCGATTGCGTTTCGCTTCCATTTTCTCTGTTTCGCCGCATCGACCTTCGTTTTCTCCATTCAACTCTGCATCTTCTTTATCATTTATTCACTTTTCTGTATAGGAATCGTTGCAGTGTGAACTGAGATGGCTGGAGGTGTGATTCGGCACTTATTGAGGAGGAAACTCAATCTCATTCTCAATCTCATTCTTCCAATTCTTCTATCTCATCCATTATCCCAAAGAGATGGTGCTGACTCTTCTGGTACTGAGCATGGCCTGGCCTGTCCAAACTATCCATGGCCTCACAAGGGCATCCTCAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATACGGAAGTCTGTGCTTCTTGTCATTCTATGTCTTTGATATCATACCGTGATCTGGTTGGTGTTGCTTATACAGAAGATGAGGTGAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGTCCTAATGATGAGGGTGAGATGTTTAACCGCCCTGGTAAACTCAGTGACCGCTTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTGATTACTAAAGCTCGTCACAATGGTCAGAATTATGTGTTTGCACTTCTAACTGGTTATCGTGACCCTCCTGCTGGTGTTTCGATTAGAGAAGGACTGCACTACAACCCTTATTTTCCTGGTGGGGCCATTGCTATGCCTAAAATGCTTAATGATGGTGCTGTTGAATATGAAGATGGTACCCCTGCTACCGAAGCTCAGATGGGTAAAGATGTTGTGTCATTCCTGAGTTGGGCTGCAGAACCCGAGATGGAAGAGAGAAAACTGATGGGATTTAAATGGATATTTGTTCTATCACTGGCATTACTTCAAGCCGCCTACTACCGCCGCCTACGGTGGTCTGTTATAAAGTCTCGCAAGCTGGTTCTTGATGTTGTCAACTAGCTCCCTTCAAGTTTCGTTTTCACACCCGGAAAGATTATTGTTGTTGGCGATAATTCTGTCAGATGCTCAAGTTGTTTGATCCTGTCAAATTAATTGATGGAATAACTGAAGCATGTTCTATTTTTGTTTAACATATAGAAATAATCCTGATCTATGTATGTGAGATGTAGTTACATCCTCTTTTTCTCCCTTCTCAGACCTATATGTATTTGTTACATTCTCCAGGACCCCATGTACTCTTATTTTTCTTCAATCTGGAGTTTATTTTTTACCTGCGATTGGAGTTTATTTTTGCTCTTACATGAAAAAAGAGATTGCCAAAATGTTCCTTTCTTTTCTTAGTTGCTACTGTTATTA 1398 0.4177 MAGGVIRHLLRRKLNLILNLILPILLSHPLSQRDGADSSGTEHGLACPNYPWPHKGILSSYDHASIRRGHQVYTEVCASCHSMSLISYRDLVGVAYTEDEVKAMAAEIEVVDGPNDEGEMFNRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVIKSRKLVLDVVN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01460 281 Gene3D - 41 236 IPR036909 GO:0009055|GO:0020037
Pste3g01460 281 PRINTS Cytochrome C1 signature 50 69 IPR002326 GO:0009055|GO:0020037
Pste3g01460 281 PRINTS Cytochrome C1 signature 186 197 IPR002326 GO:0009055|GO:0020037
Pste3g01460 281 PRINTS Cytochrome C1 signature 217 236 IPR002326 GO:0009055|GO:0020037
Pste3g01460 281 PRINTS Cytochrome C1 signature 70 89 IPR002326 GO:0009055|GO:0020037
Pste3g01460 281 PRINTS Cytochrome C1 signature 115 135 IPR002326 GO:0009055|GO:0020037
Pste3g01460 281 PRINTS Cytochrome C1 signature 236 251 IPR002326 GO:0009055|GO:0020037
Pste3g01460 281 PRINTS Cytochrome C1 signature 148 172 IPR002326 GO:0009055|GO:0020037
Pste3g01460 281 PRINTS Cytochrome C1 signature 197 216 IPR002326 GO:0009055|GO:0020037
Pste3g01460 281 SUPERFAMILY Cytochrome c 45 235 IPR036909 GO:0009055|GO:0020037
Pste3g01460 281 ProSiteProfiles Cytochrome c family profile. 64 171 IPR009056 GO:0009055|GO:0020037
Pste3g01460 281 FunFam Cytochrome c1, heme protein, mitochondrial 237 281 - -
Pste3g01460 281 FunFam Cytochrome c1, heme protein 41 236 - -
Pste3g01460 281 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 236 280 IPR021157 -
Pste3g01460 281 Pfam Cytochrome C1 family 52 268 IPR002326 GO:0009055|GO:0020037
Pste3g01460 281 PANTHER CYTOCHROME C1 36 279 IPR002326 GO:0009055|GO:0020037
Pste3g01460 281 Gene3D - 237 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01460 Pste-Chr3 9079381 9083392 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01460 30 281 Chloroplast and Mitochondria Gene Families AT5G40810 89.683 2.17e-157 437