Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01455 ATGCGATTCCATTTAGGTGGGTAGGTGGAATTGGACTCAAAATTAGGAGTAAATTTTGGTCATACAATCGTATGGGTGAGATTTACTTGTCTCATGCTCTCATCTCTGACCTGATTTTATTGTTGTGCCTGTTACTCAGATCAATGAACACTGAAAAATGTAATATGTTAAGAATGTTGTTGAAGGGGAGTATTGAATATTTTTGGGTTGGTATTGTTTCTTTCTTATGTGAAAACATGAATATATTCAAATTCAGTAGAACGGTTACATTGTTTCACAATCTGCATGTTCAATTGGCCATTGTATGGCTAATGGACAAGGGGGTGCCACCTAGCCTCTTCGTCAATGATGGTTCTTTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAGGAGAAAGGGAAGAATGGAAAATTAGAGGATTCTAAACCAATTAAGGTTATTTCAGGGTCTCTATCTCCCAATCCCTCCATTGCCAAAACGTCTGTAGACTTGAAGTTTAATGATACAAGGAAAACATCCTTGGGGGGTTCTGGTGGCAAGTTAGCTTTTAGTTTAAAACAAAAGTCAAAGCTGGTTCCACCCCCTGTTAAATTGAGTGCTGATGAGGATGAAGAAGAAATAGAAGCTGGGTATGTTTCAAATGATGCACCAGTAAAACGGCAAAAGTTAGGCCAGGAGGAAGGCATTGACCAATCATCAAGACAACTTGATGTTGCACCTCCTTCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAACTAGCAAGTTTTGTGGCTAAGAATGGAAGGCAATTTGAGGATGTTACACGACAAAAAAATCCTGGGGATACACCTTTCAAATTTTTATTTGATGAGAGATGTGCTGAATACAAGTATTATGAATATCAGCTTGCTCAAGAAGAAAAGGCTCTTGCGCAGTCAAGGGAATCACAGGTGCCTCGTAATGGGAGTACAAGCACTTCATCTTCCAAACAGACTAGTGGTCATCAAAGATCATCTCAGCAGCACGCAGCCTATCAAATTCCTGCATCTGCTTTATATGAAATTGCTGACAATTCAAGAGCTTCTGGATCTTCACTTCAAACACCATCAGTAGGAAGCAGTGAAGAGCCCAGTGGTTCATCAAATGCTGATTCTTTGGCTCTGATGGAGTTTTACATGAAGAAAGCTGCACGGGAAGAGAAGTATAAACAACCTAAGCAGTCAAAAGATGAGATGCCTCCTCCTGCTTCACTTCAAGGCAAAAAAGGCCATCACATGGGTGATTTCATTCCTCCAGAAGAACTTGAGAGGTTCTTGGCTAGCTGTAATGATGTCGCAGCACAGAAGGCTGTAAGGGATGCTTCTCAGAGGGCTAAGATTCAGGCTGATAATGTAGGCCACAGACTCCTGTCAAAAATGGGATGGAAAGAAGGTGAGGGTCTGGGCGGATCCAGGAAGGGTATTGCGGATCCTATCATGGCTGGCAATGTTAAGAAGAATAACTTGGGGGTTGGTGCTCAGGAGCCCGGGGAGGTGACTTCTGAGGATGACATATATGAGCAGTACAAAAAGAGGATGATGCTTGGCTACCGCTACAGACCCAATCCTCTGAACAATCCTCGCAAGGCTTATTACTGAACTTGACAATGGGAGCTTTGTGCAAGTCTTTTCAGGAAGAAAGGAGCTTTTACAATGTTGGATGAATTGGTGTGTTGATATTAGGGTTTTTTAATCGTGTGCTGCACTGGTTGTTGTCTTTTGAACTTAAGATTTGGGGATAAAAGAGATGGATGGGTTTAACGTTCATTATAATAACATTTTTATCCGTTAAAGAATAATGTTTTTTTCTTCTTATTTTTACTTGTCAGAGCTCTTTTGGACCATGTTTTGTTTTATTGCTAGTCTATTATGAAGTGGTACAGAGATATTATGGGGATAAGGCGTGGGTTTCTGGGAACCACCTTTGTCTTGAATATTGATGTTGTGTGATGATATATTAAATGACTTCATTGTCATGATTAAGATGTTTTATTAAGTGAGTACAAGAGGGAATGAATAAAGAAAGAAAATTAAGTA 2063 0.4033 MGEIYLSHALISDLILLLCLLLRSMNTEKCNMLRMLLKGSIEYFWVGIVSFLCENMNIFKFSRTVTLFHNLHVQLAIVWLMDKGVPPSLFVNDGSFMERFKQLQQEQEKGKNGKLEDSKPIKVISGSLSPNPSIAKTSVDLKFNDTRKTSLGGSGGKLAFSLKQKSKLVPPPVKLSADEDEEEIEAGYVSNDAPVKRQKLGQEEGIDQSSRQLDVAPPSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDERCAEYKYYEYQLAQEEKALAQSRESQVPRNGSTSTSSSKQTSGHQRSSQQHAAYQIPASALYEIADNSRASGSSLQTPSVGSSEEPSGSSNADSLALMEFYMKKAAREEKYKQPKQSKDEMPPPASLQGKKGHHMGDFIPPEELERFLASCNDVAAQKAVRDASQRAKIQADNVGHRLLSKMGWKEGEGLGGSRKGIADPIMAGNVKKNNLGVGAQEPGEVTSEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01455 517 SMART G-patch_5 432 479 IPR000467 GO:0003676
Pste3g01455 517 ProSiteProfiles SURP motif repeat profile. 228 271 IPR000061 GO:0003723|GO:0006396
Pste3g01455 517 MobiDBLite consensus disorder prediction 332 356 - -
Pste3g01455 517 SUPERFAMILY Surp module (SWAP domain) 211 279 IPR035967 GO:0003723|GO:0006396
Pste3g01455 517 Gene3D Surp module 200 285 IPR035967 GO:0003723|GO:0006396
Pste3g01455 517 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 81 517 IPR040169 -
Pste3g01455 517 MobiDBLite consensus disorder prediction 281 315 - -
Pste3g01455 517 Pfam G-patch domain 435 478 IPR000467 GO:0003676
Pste3g01455 517 Pfam Surp module 227 276 IPR000061 GO:0003723|GO:0006396
Pste3g01455 517 MobiDBLite consensus disorder prediction 201 226 - -
Pste3g01455 517 ProSiteProfiles G-patch domain profile. 434 481 IPR000467 GO:0003676
Pste3g01455 517 MobiDBLite consensus disorder prediction 371 398 - -
Pste3g01455 517 SMART surpneu2 226 280 IPR000061 GO:0003723|GO:0006396
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01455 423 490 C2H2 Transcription Factor Family AT5G26610 47.826 3.47e-10 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01455 3 9027938 9034470 Pste3g01455 3 9027938 9034470 ECH