Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01454 TATCAAGACACTTTATTTGGTGCAATAGGATGCAATTACTTCAAAGATTGCTACATTCAAGGTGAAGTGGATTTTATTTTTGGTTTTGCACAATCTTATTACGAGAATTGTTTGATCAACGTTGTAGGGGAAGATAAATTTTTACTAGGTTTTATCACAACTCATGGACGAGATTCATCAAATGACCCAAGTGATTTTGTATTTAAAGGGGGTTCCCTTAAAGGGAATGATAAAATGAATTTGGGAAGAGCACGAAGTGGTCACTCTAGAGTTATATTTCATGGAACAAATTTTTCTTCCATTGTGACTCCTCAAGGATGGAATGCTTGGAATTATGTTGGCCAAGAA 348 0.3506 YQDTLFGAIGCNYFKDCYIQGEVDFIFGFAQSYYENCLINVVGEDKFLLGFITTHGRDSSNDPSDFVFKGGSLKGNDKMNLGRARSGHSRVIFHGTNFSSIVTPQGWNAWNYVGQE 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01454 116 Pfam Pectinesterase 1 111 IPR000070 GO:0030599|GO:0042545
Pste3g01454 116 Gene3D - 1 116 IPR012334 -
Pste3g01454 116 SUPERFAMILY Pectin lyase-like 1 111 IPR011050 -
Pste3g01454 116 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01454 Pste-Chr3 9024366 9024799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01454 1 116 Carbohydrate Esterase AT2G19150 44.538 3.32e-27 99.8