Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste3g01429 | GTACATTGGCAAATTAACGGACCCCGACACAGCGCCAAAAAACCCTCGTACCCGGTTTCAAATGGGTCGCACCTAGGTTTACACCTTCATTCCTTTGTCCCTTCCCCTTCTTTCACTCTTCCCCAATTCTCCTTCCTCAATTTCTCACTCCCTTCGCCATGTCCACCAGGATTTGTAAGTTTTATGCCCGTGGGGCATGTTTGAAAGGGGAGCAATGTGATTTTGTTCATGAGAGAAAGGATGATATTTGTAGCTATTATCAAAAAGGATTCTGTGCTTATGGTAGTAGATGCAGATATAAGCATGCCAAAGCTTCTCAAGCGTCATCTTCAGCAAATGGACGCCATTCTCAGGTTTCAGATTCTGTGGTGAATCATCATACCACTAAAGGAACGTCAAGTTGGGTTCCCAAGGCTGTGAAGTTATCTTCACCAGACAAACGTGGTAGGAGTTCACAACTAAAGAATATGTCCTATCTTGGAAATGATGTCGGTCAATCCAGTACTAGTAATACCATACCATCTGAACATTTATTTTGTGCATTTGCTGCTTCCAACTGCCCCTTTGGAGATAAATGTTCTCGCCTCCATGGAAATCAATGTTTATACTGTAGAAAGTTTTGCTTACATCCTACTGATCGAAAGGAAAAAGAAAATCATTTGAGGACTTGTGATAAAAAGGAAAAATACCTTAAGGCTTTGAAAGATAGTGAAGAAGTAGAATGCAATGTTTGTTTGGAGCGTGTTCTTTCCAAACCTAAACCATCTGATTGTAAGTTTGGGCTGCTTCCTGAATGTGACCATGCTTTCTGTTTATCCTGTATCCGCAATTGGCGTAATAGTGCCCCACCCGCTGGAATGGACGTCAATAATACTAGCAATGCTAATACAGTGAGAACATGTCCTGTTTGTCGGAAACTATCATACTTTGTCATTCCAAGTGGTATTTGGTACACTACTAAAGAAGAAAAACAGGAAATTATTGACAACTACAAGGCAAACTGCAAACTAATTGATTGCAAGCATTTTAACTTTGGAGATGGGAATTGTCCATTCGGTACTAGTTGCTTCTACAAGCATACAGTGAAGCCTGGCTCATACACATGGATACATCACAGACCACCTCCTCAACGTAGGCAAAACCATTTTGATATGTACAACATGTTGGACATGCTCAGTGAAGTCGAATTAACAAGTACAGAATACTTTTCCATCATGAGGGACTCAGACTTTTTTGATGATATGGATCCATTGGAGATGATGGATTTATCTGATAGGCTTGCTGGTGAATCTGGTCCTTGTTTAGGTCCTTTTGATTCTGATGAGGATGATGACATGGATATTTTTCGGATGACTGTGTTGTCAGAAGCACTAGTTTCTGGTGTCGATGACTTTACTCCTGAAGATTTTGATGAAGATTTCAATCCTATGGAGGCTGCCTTGATATCAATGATGATGCAATCTAATATAGATGAGGAAGATGAAGATTACAGAACTTCAAGATTTATTCTAGTTTATGATATGATGCTAAAACTCGTGCCTACAGCTGTTATTCGTGGTCATATGCCATTTTGTATATTTTTTAAGATCACTATTGAAGGTGTTTTGGCTTTGAGGGTTTTGCTTAGTCTTGCCTCATTGCATGTCGAATTGGTTCTTTGTAAGTTCTTTGCTCATGGAGCCTGTCTGAAAGGGGAGCATTGTGAATTTTCTCATGACTGGAAAGATCCTCCAAATAATATATGCACATTTTATCAGAAAGGAGTCTGTGCTTATGGTAGTCGTTGCAGATATGATCATGTCAAAGCTTCTCGAGCGCAATCTTCCGCTCCATCTTCTTCAGTAATTGAACAGCAGACCCTGGTTTCAGATACTGTTGCTTTTGGAAATACTAGACCTACATCAAATGGTGTTGGTAAAGTTGCAGAGTTTTCTATTTCCACTAGTCCTTACCTTCTTCCTAGTGAACCGGTTTGGAATCAAGAACTGGTTTGGAATCAGGAACCGGCTTGGAATCAAGAATTTGAGTATCAAGAACTTTTAGGGGAAGAGAATGTTGGTCAATCTATAATCACTGCACCTTCTGAGCTTTCAATCTGTTCATTTGCTGCTGCTGGCAACTGCCCACGAGGGGAAAAATGTCCACATATTCATGGAGATCTATGTCCCACCTGTGGAAAGCATTGCTTGCATCCTTTCCGGCCTGAGGAAAGAGAAGAACATATGAAGAATTGTGAAAATAAGCAGAAGCATCTTGAGGCATTGAAACGAAGTCAAGAAATTGAATGCAGTGTTTGCCTGGAGCGCGTTCTCTCAAAGCCTACAGCAGCTGAACGTAAGTTTGGGTTGCTATCTGAATGTGATCATCCATTCTGCATATCCTGTATTAGGAATTGGCGAAGTAGTAACCCAACATTGGGGATGGATGTTAATAGCACATTGAGGGCTTGTCCTATTTGTCGTAAGCTATCATACTTTGTCATTCCAAGTGTCATTTGGTACTCAACAACTGAAGAAAAACAAGAAATCATTGACAACTACAAGGCAAAGCTCAAGTCAATAGATTGCAAGCACTTTGACTTTGGGGAGGGGAACTGCCCTTTTGGAACTAGTTGTTTCTACAAGCATGCATATCGAGATGGCCGTCTGGAGCAGGTAGTTTTGCGACATCTAGGGGCTGCAGATGGCGATACTGTAATTGCTAAAGACATCAGTAAACCGTATGCACTTGATAACCCAAAATTTTCTGAAATGTACCAAGAGACTGAAGAGAGAGAAGCTGCACTGTGCATTCTGTCGTTTACAATC | 2807 | 0.4083 | MSTRICKFYARGACLKGEQCDFVHERKDDICSYYQKGFCAYGSRCRYKHAKASQASSSANGRHSQVSDSVVNHHTTKGTSSWVPKAVKLSSPDKRGRSSQLKNMSYLGNDVGQSSTSNTIPSEHLFCAFAASNCPFGDKCSRLHGNQCLYCRKFCLHPTDRKEKENHLRTCDKKEKYLKALKDSEEVECNVCLERVLSKPKPSDCKFGLLPECDHAFCLSCIRNWRNSAPPAGMDVNNTSNANTVRTCPVCRKLSYFVIPSGIWYTTKEEKQEIIDNYKANCKLIDCKHFNFGDGNCPFGTSCFYKHTVKPGSYTWIHHRPPPQRRQNHFDMYNMLDMLSEVELTSTEYFSIMRDSDFFDDMDPLEMMDLSDRLAGESGPCLGPFDSDEDDDMDIFRMTVLSEALVSGVDDFTPEDFDEDFNPMEAALISMMMQSNIDEEDEDYRTSRFILVYDMMLKLVPTAVIRGHMPFCIFFKITIEGVLALRVLLSLASLHVELVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTFYQKGVCAYGSRCRYDHVKASRAQSSAPSSSVIEQQTLVSDTVAFGNTRPTSNGVGKVAEFSISTSPYLLPSEPVWNQELVWNQEPAWNQEFEYQELLGEENVGQSIITAPSELSICSFAAAGNCPRGEKCPHIHGDLCPTCGKHCLHPFRPEEREEHMKNCENKQKHLEALKRSQEIECSVCLERVLSKPTAAERKFGLLSECDHPFCISCIRNWRSSNPTLGMDVNSTLRACPICRKLSYFVIPSVIWYSTTEEKQEIIDNYKAKLKSIDCKHFDFGEGNCPFGTSCFYKHAYRDGRLEQVVLRHLGAADGDTVIAKDISKPYALDNPKFSEMYQETEEREAALCILSFTI | 883 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste3g01429 | 883 | Pfam | RNA-binding, Nab2-type zinc finger | 286 | 307 | - | - | |
| Pste3g01429 | 883 | Pfam | RNA-binding, Nab2-type zinc finger | 802 | 824 | - | - | |
| Pste3g01429 | 883 | Pfam | RNA-binding, Nab2-type zinc finger | 646 | 665 | - | - | |
| Pste3g01429 | 883 | Pfam | RNA-binding, Nab2-type zinc finger | 5 | 24 | - | - | |
| Pste3g01429 | 883 | Pfam | RNA-binding, Nab2-type zinc finger | 500 | 519 | - | - | |
| Pste3g01429 | 883 | Pfam | RNA-binding, Nab2-type zinc finger | 127 | 145 | - | - | |
| Pste3g01429 | 883 | SMART | c3hfinal6 | 2 | 26 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | SMART | c3hfinal6 | 281 | 309 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | SMART | c3hfinal6 | 27 | 51 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | SMART | c3hfinal6 | 122 | 146 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | SMART | c3hfinal6 | 524 | 549 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | SMART | c3hfinal6 | 797 | 825 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | SMART | c3hfinal6 | 496 | 521 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | SMART | c3hfinal6 | 642 | 667 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | MobiDBLite | consensus disorder prediction | 56 | 86 | - | - | |
| Pste3g01429 | 883 | ProSiteProfiles | Zinc finger C3H1-type profile. | 281 | 310 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | ProSiteProfiles | Zinc finger RING-type profile. | 710 | 768 | IPR001841 | - | |
| Pste3g01429 | 883 | ProSitePatterns | Zinc finger RING-type signature. | 213 | 222 | IPR017907 | - | |
| Pste3g01429 | 883 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 163 | 284 | IPR013083 | - | |
| Pste3g01429 | 883 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 684 | 803 | IPR013083 | - | |
| Pste3g01429 | 883 | ProSiteProfiles | Zinc finger C3H1-type profile. | 25 | 52 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | ProSitePatterns | Zinc finger RING-type signature. | 734 | 743 | IPR017907 | - | |
| Pste3g01429 | 883 | ProSiteProfiles | Zinc finger C3H1-type profile. | 523 | 550 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | SUPERFAMILY | CCCH zinc finger | 3 | 25 | IPR036855 | GO:0046872 | |
| Pste3g01429 | 883 | ProSiteProfiles | Zinc finger C3H1-type profile. | 797 | 826 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | SUPERFAMILY | CCCH zinc finger | 25 | 50 | IPR036855 | GO:0046872 | |
| Pste3g01429 | 883 | ProSiteProfiles | Zinc finger C3H1-type profile. | 641 | 668 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | CDD | RING-HC_MKRN | 187 | 252 | - | - | |
| Pste3g01429 | 883 | ProSiteProfiles | Zinc finger C3H1-type profile. | 500 | 522 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | SUPERFAMILY | CCCH zinc finger | 497 | 520 | IPR036855 | GO:0046872 | |
| Pste3g01429 | 883 | PANTHER | MAKORIN-RELATED | 478 | 841 | IPR045072 | GO:0000209|GO:0061630 | |
| Pste3g01429 | 883 | SUPERFAMILY | CCCH zinc finger | 526 | 547 | IPR036855 | GO:0046872 | |
| Pste3g01429 | 883 | ProSiteProfiles | Zinc finger C3H1-type profile. | 126 | 147 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 29 | 49 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | CDD | RING-HC_MKRN | 708 | 768 | - | - | |
| Pste3g01429 | 883 | Pfam | CCCH-type zinc finger | 528 | 547 | IPR041367 | - | |
| Pste3g01429 | 883 | SMART | ring_2 | 189 | 251 | IPR001841 | - | |
| Pste3g01429 | 883 | SMART | ring_2 | 710 | 767 | IPR001841 | - | |
| Pste3g01429 | 883 | ProSiteProfiles | Zinc finger C3H1-type profile. | 1 | 24 | IPR000571 | GO:0046872 | |
| Pste3g01429 | 883 | SUPERFAMILY | RING/U-box | 179 | 258 | - | - | |
| Pste3g01429 | 883 | ProSiteProfiles | Zinc finger RING-type profile. | 189 | 252 | IPR001841 | - | |
| Pste3g01429 | 883 | Gene3D | - | 1 | 65 | - | - | |
| Pste3g01429 | 883 | Gene3D | - | 495 | 562 | - | - | |
| Pste3g01429 | 883 | MobiDBLite | consensus disorder prediction | 56 | 102 | - | - | |
| Pste3g01429 | 883 | SUPERFAMILY | RING/U-box | 699 | 774 | - | - | |
| Pste3g01429 | 883 | Pfam | Zinc finger, C3HC4 type (RING finger) | 710 | 767 | IPR018957 | GO:0046872 | |
| Pste3g01429 | 883 | Pfam | Zinc finger, C3HC4 type (RING finger) | 189 | 251 | IPR018957 | GO:0046872 | |
| Pste3g01429 | 883 | Coils | Coil | 685 | 709 | - | - |
Transcription factors information