Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01405 AAAAACATAGGTGAGCCACGTGTTAAAATTTACTACTTCGTCCTCTGGACCTTGATTTGCCCTATTCAGATTCACTTCAGTTACCCTCTGCGTCTTTCTCCAAACAACACAACCCAACTCGTGATGGCACTGTGCAACCGCGTCAGATCGGGAATCTCTCTCTTCAGCAAATCCCTCTTTCTCTCTTCCCAGCGATCCACTCTCCATCGATCCCTCGTTGCTCCTTCCGTTTCCCTCGCTTCAAGATATTACGCCGATGTGCCGGGGCAAAAGGATAGCGATGTCAAGGTCCCTTTGGCTTTGTTTGGAGGCTCAGGAAACTATGCCTCTGCTTTGTACATTGCATCTGTGAAATCTAAAGCAGTGGAAAAGGTTGAGGCCGAGCTTAATATATTTGTTGAGGCTGTAAAGAATAGTACTGTATTTTCACAGTTCATAAAGGACTTGTCTGTGGCTAAGGATGTTAGAGTAAAAGCCATCCAGGATATCTGTGGTCAAGCTAAGTTTTCGGATGTTACAAAGAACTTCCTTGCTCAGGATTGGCATCCCAAAGTAAAGCAAACCAGTACACTGCTTGATCTTCTTCAATGGATACTTTGGTCAGTGTGGCCTTTAGTTCAATGTGGGTATTCTGAAATTGAAATTCTTGTTGCTGAGAATGGAAGGCTTAAAAACATAGACACCATTGCAAAGAGGTTTGCGGAGTTGGCAATGGCATATAAGGGAGAAGTGAAAGCGACCGTGACCACTGTTGTTCCTCTTCCACCTGAGGAGGAAAAGGCGTTGAAGGAGACTCTTCAGGAAATAATAGGCTCTGGAGCAAAGGTTAATCTTGAACAGAAGATTGATCCAAGTATACTTGGTGGTCTTGTACTGGAATTTAGCCAGAAGGTCTTCGACATGTCTATTAAGACCAGGGCACAACAAATGGAGAGGATCCTCCGAGAGCCTGTAAACATTTCCAACATCTAG 972 0.4434 KNIGEPRVKIYYFVLWTLICPIQIHFSYPLRLSPNNTTQLVMALCNRVRSGISLFSKSLFLSSQRSTLHRSLVAPSVSLASRYYADVPGQKDSDVKVPLALFGGSGNYASALYIASVKSKAVEKVEAELNIFVEAVKNSTVFSQFIKDLSVAKDVRVKAIQDICGQAKFSDVTKNFLAQDWHPKVKQTSTLLDLLQWILWSVWPLVQCGYSEIEILVAENGRLKNIDTIAKRFAELAMAYKGEVKATVTTVVPLPPEEEKALKETLQEIIGSGAKVNLEQKIDPSILGGLVLEFSQKVFDMSIKTRAQQMERILREPVNISNI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01405 323 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 105 178 IPR026015 -
Pste3g01405 323 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 276 295 IPR020781 GO:0015986|GO:0016020|GO:0046933
Pste3g01405 323 Hamap ATP synthase subunit delta [atpD]. 100 316 IPR000711 GO:0015986|GO:0046933
Pste3g01405 323 Gene3D - 105 179 IPR026015 -
Pste3g01405 323 Pfam ATP synthase delta (OSCP) subunit 106 178 IPR000711 GO:0015986|GO:0046933
Pste3g01405 323 Pfam ATP synthase delta (OSCP) subunit 216 314 IPR000711 GO:0015986|GO:0046933
Pste3g01405 323 NCBIfam ATP synthase F1 subunit delta 215 314 IPR000711 GO:0015986|GO:0046933
Pste3g01405 323 PANTHER ATP SYNTHASE DELTA CHAIN 82 316 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01405 Pste-Chr3 8720312 8726543 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01405 114 323 Primary Pumps ATPases AT5G13450 47.143 2.54e-59 187