Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01394 TGATATAGTGGATTTTCAGCTTTTTGGGATGTTCTTTGATTTGCTATTGACAACATTGAATTCAAACAAAGTTTTTGTATTTGAGAAATTTAATTCATACCATTGATTTTCTTGTATAATCTAATCACTAGGCAAAACAATACATAAAGGCATGCTGATGACTACTTGCAGTATTATTGTGTTCCAACAACTTTGAACCCAATTAGATGCATTATGATTGAGTTATTGACTAACTTATACAGGATAGCTATTCAGACACCAAACAGACAATTTGGATAACTTGACTGAAATGATGGAATGCAGTTGATTGAGTTTACAGAAGTTGCAAAGGACCAATAGAGCACTACAAGGAGTTTAACTGAGAGCCTCAGGGATGGGTCATTTGGGTGTTTGTCATCAAGTGATGTTCGTTGGTCAGCATGAGGAATACGGAAGTAAACTTTCTCCAAGTATTCCTACGGTGGATGAATCAAAAGATAAAGAAAAAATTATTCAAGTTGAACCTATCTTCATGCCAAAATTTAAGAAAAGAAAACGTCTTAGCCTTAATCGTCTTAGGGAGATTAAAGCAGATATGTGTGTGAGGCAAAGTAGTGACACACCTAAAACAAAGAAGTGTGAAAGCAGAGATAGGTGGTCAGCTAAGAGGTATATGTTGGCTGAGCAAAGCATGTGGGAGGTCTTAAAAGGTGAAGGTGCAACTTTTGAAAACCCAATTGCCCGACCTGCATTAAGAATGGCTGCCCGAAAGCACATTGGTGACACTGGACTATTAGATCACTTACTGAAGCACATTGATGGGAAAGTGGCACCTGGAGGAACTGAGCGGTTCCGACGATGTTTCAACACCAACGGAGTCATGGAGTATTGGTTGGAGAGTGCTAGTTTGGAAGAGATCCGCCTGGCAACGGGAGTGCAAGACCCTTACTGGGTGCAACCATCTAAATTAAGGGCAGGCAGTGCTCCTACTCAGAATACTGATTCTATTGGTGAACTAAAAATGCTTCAAACTGAAATGGCCAAGATGAAGAAAGACATGCAAGAACTCATTGCCAAGAAACAAGAAAAAAGTGAAATGCATTTGATGGAGGAGAGACGTAAAAGTTATGTGAATTGGAAAGCTATGACTGATCAGCGTGTAACAGCTATTGTGACTTCTTTGAAGGGTGTGCAGGGGATGCATGAAGACATGTTGATTTGGAAAACTAAAGTTGAGCAACAGCTAATGGAAATAACCAATAAAACGAGTGATGTGCGAAAATTGAGAGAGCACACCACTTCAAGTTATTCTCCAGTAAGCTGGGAGGATTGGCTTCAAAGCACCAACCTAGACAATATTCAGGGAAACGAACTAGCACCTTGGTTTGGGCCTGAGCTGCTTAATGCCCCACAGGAGTTTGAACTTCAAGATCCGAACTCAACCCTACCAACTCAGCTACACAGTGTAGAACCGACTAACATGAAGAGCAATTTGCTGGAGTTGGTGCCAAAGAAGCTAAGGGAAGATCAACCTAATTTGACCCCTGATTCTTCTACGACTGTTTATTCAAAGTCAGACCTTGACAATTCATTGATATTGTGTCAGGACATGTTCATGGAGTTATTTAAGTCAAGGGATAAAATGGAGCAGCAGTTATTGGAGATATCAAATACGGTATATGGGATGCTGGCAAGGAAATAGACTTACATCGAATGGAAGTATCAAGCATAATTTTAGGATTGAAATCGTTAACCATTTTCTCTTGTTACTCTCATAGAGTGTGTAGGGTTTACATATTGTACAGGGTAAACAATCTAATGGTGAAGTGAAATCCTTTTCCAACCACAGATAGAAGCCACATCTGAATCTCACCAACAGTGAGCTGCAAATTGTTAATATTTTCCCCTGGTCTTTTACAGTTTATGCTATAATTTAAGGTAGGACGTCAGTAGGGCTGTTATTATAAGTGACAGTTTTTTCTAGTTTTGTTCAGTAAAAATTAAGCTGCTTTTGATAGCCTTTATTTGATTTTTTAGATCGAGCGACTCATGCAAATATGTACTTAAACCTTATTTGGGGTATTATGTATAATTTATGCA 2079 0.3896 MGHLGVCHQVMFVGQHEEYGSKLSPSIPTVDESKDKEKIIQVEPIFMPKFKKRKRLSLNRLREIKADMCVRQSSDTPKTKKCESRDRWSAKRYMLAEQSMWEVLKGEGATFENPIARPALRMAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRCFNTNGVMEYWLESASLEEIRLATGVQDPYWVQPSKLRAGSAPTQNTDSIGELKMLQTEMAKMKKDMQELIAKKQEKSEMHLMEERRKSYVNWKAMTDQRVTAIVTSLKGVQGMHEDMLIWKTKVEQQLMEITNKTSDVRKLREHTTSSYSPVSWEDWLQSTNLDNIQGNELAPWFGPELLNAPQEFELQDPNSTLPTQLHSVEPTNMKSNLLELVPKKLREDQPNLTPDSSTTVYSKSDLDNSLILCQDMFMELFKSRDKMEQQLLEISNTVYGMLARK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01394 435 PANTHER PROTEIN DYAD 5 433 IPR044221 GO:0007131|GO:0051177|GO:0051321
Pste3g01394 435 Coils Coil 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01394 Pste-Chr3 8642256 8645468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01394 87 171 PHD Transcription Factor Family AT5G22260 41.860 1.12e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01394 3 8642256 8645468 Pste3g01394 3 8642256 8645468 ECH