Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01380 TTATTTAGAAAAATACGGAAGAGTAAAAAAAACAAAAGAGATGCAAAAAGAAAAACTCCACCTACTGCATTTAGCTATGGAACACCACAAACATGCTCCAGCTCCTGCTTCAACAACTGAAGGACAACCTATACGATGTAAAGCTGCTGTTGCTAGAAAAGCTGGTGAGGCATTGGTTATTGAAGAGATAACTGTGGCGCCGCCAATGGCTGGTGAGGACCCTCCTGCCGTTTTCCCAAGAATTCTAGGACATGAGGCAACTGGGGTTGTGGAAAGTGTAGGGAAGGATGTGACTGAAGTTACAAAAGGTGATGTGGTTATTCCAGTTATCCTACCAGAATGTGGGGAGTGTATAGATTGCAAATCAACCAAGAGCAACCGTTGCACTACGTTCCCTTTCAAGGTTTCTCCTTGGATGCCTCGAGATGGTACCACTAGATTCACTGACCAAAATGGAGAGACCATATACCATTTCTTGTTTATTTCAAGTTTCAGTGAATACACTGTGGTGGACGTTGCCAATCTGATAAAGATTGACCCAGAAATTCCTCCTCACAGGGCATGCCTTCTTGGCTGTGGTGTTTCAACAGGGGTTGGTGCTGCTTGGAGAACTGCAAGTGTAGAACCAGGTTCTACAGTAGTTATTTTTGGTCTGGGATCTATTGGATTAGCAGTTGCAGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATAGGTGTGGACATCTACCCAGAAAAATTTGAAATTGATTATTGCTTCGAATGTGTTGGTATGGCATCATTGGTGCATGAAGCATATGTTTCTTGTAGAAAGGGTTGGGGAAAAACAATTGTTTTAGGAGTGGACAAGCCAGGAGCCAACATAAGCCTCAGTTCTTATGATGTCCTTCATGATGGAAAGAGCCTCATGGGATCCTTATTTGGAGGTCTCAAACCCAAGTCTCATGAATTGCAGTTGGATGAATTTGTCACTCATGAGCTGGAGTTTAAGGACATCAATAAAGCTTTTGATTTGTTGAGTAAAGGACATAAAACTGAGATGCTATCCTATTGCACTGCAAATGCACTTGAAGCTCCAGTAAATCTGTATACTCCAGAAACAACATCATTTGGTATTTCCCATACTAAGGAAGCTAAGCCATGCAACGAACTATTATCTACTTTCCACTTGAAAAACAAACTTAAATCATCATCATCATATGCAGCAACCCACCTTTCTCCTTTAAGCCTCTCCACTGCAGCAAATGTGCCTTCTGTCAGAAGGTCATATCTTGGATTAGCACTCCAGAATGTAGCACTTGGTGTGTCTCCCTTAGCTATGTCTTCCTTTATGTCACCAAATTTTATTCCTTTTGGAGGTGAGTCTCCAAAGAGA 1375 0.4204 MQKEKLHLLHLAMEHHKHAPAPASTTEGQPIRCKAAVARKAGEALVIEEITVAPPMAGEDPPAVFPRILGHEATGVVESVGKDVTEVTKGDVVIPVILPECGECIDCKSTKSNRCTTFPFKVSPWMPRDGTTRFTDQNGETIYHFLFISSFSEYTVVDVANLIKIDPEIPPHRACLLGCGVSTGVGAAWRTASVEPGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDIYPEKFEIDYCFECVGMASLVHEAYVSCRKGWGKTIVLGVDKPGANISLSSYDVLHDGKSLMGSLFGGLKPKSHELQLDEFVTHELEFKDINKAFDLLSKGHKTEMLSYCTANALEAPVNLYTPETTSFGISHTKEAKPCNELLSTFHLKNKLKSSSSYAATHLSPLSLSTAANVPSVRRSYLGLALQNVALGVSPLAMSSFMSPNFIPFGGESPKR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01380 445 PANTHER ALCOHOL DEHYDROGENASE 236 330 - -
Pste3g01380 445 Gene3D - 184 236 - -
Pste3g01380 445 SUPERFAMILY GroES-like 26 191 IPR011032 -
Pste3g01380 445 Gene3D - 56 183 - -
Pste3g01380 445 Gene3D - 237 292 - -
Pste3g01380 445 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 306 IPR036291 -
Pste3g01380 445 Gene3D - 293 329 - -
Pste3g01380 445 Pfam Alcohol dehydrogenase GroES-like domain 58 165 IPR013154 -
Pste3g01380 445 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01380 Pste-Chr3 8559840 8566990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01380 65 362 Monolignol Biosynthesis Gene Families AT2G21730 25.076 9.16e-08 52.0