Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01356 TTAAAAACAACTTTGTATGTTATAACGTAACTTAAAAGAAAAGAAAAAATGAGAGTTTGGAAGAGAAGTTGAATAGCATAGAAGAAGAAGAAGAAGAATTGGTGAATGGAGTCAGGTCCTCCGGCGAACGATCTGTGTTCGGTGTGTCATGGCAATTTCCACATCCCCTGCCAAGCCAATTGTTCTCACTGGTTCTGCGGAAATTGCATCATGCTTGTGTGGCAGCACGGATCGGGGGCACGCCCTTGCAAGTGCCCTCTCTGCCGCCGACCCATCACTCTGTTAGTCCCTACAGAAGGGTCTCTGAGGCAGAGGCACGACCCTGAAGTTGCTCAGATTCTGTCAAAGATTCATGCTTATAATCGCTTCTTTGGAGGCCAACCCACTTCTCTTCTCCAGAGACTGCAAGATCTTCCTTTTCTCTTGCACCGCCTCCTCCGTGAGTTCCTTGACCCTCAAAGATCCCTCCCTCTCGTCATTCGTGCCCGTGTCTTTGTTGCGATGATAGTAAGTGTCATATACATCTTCAGTCCTATTGACATCATTCCTGAAGGGATATTAGGAATAGTTGGTCTCTTAGATGATCTCCTAATTGCACTCATATGCTTCCTACATGTTGCTGCACTATATAGATCAGTACTTTACATCCGTCATGGGGGTTCTTGAACATGTTGTACAATTTTACAGGTAAAATGGGATGATGCATAATAGTGGGCATTATTCTTACATTTTCAAAGTTGAACTACTTTGTTTTGTATGTACATAGACAAGTTCCATTTCGAATAGTGGAATTAGTAATGGAGATAACAATGAAAAAGCTCTCTTAAATTTCTTACAGCCCTACAAAATAA 851 0.4254 MESGPPANDLCSVCHGNFHIPCQANCSHWFCGNCIMLVWQHGSGARPCKCPLCRRPITLLVPTEGSLRQRHDPEVAQILSKIHAYNRFFGGQPTSLLQRLQDLPFLLHRLLREFLDPQRSLPLVIRARVFVAMIVSVIYIFSPIDIIPEGILGIVGLLDDLLIALICFLHVAALYRSVLYIRHGGS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01356 186 SMART ring_2 11 53 IPR001841 -
Pste3g01356 186 SUPERFAMILY RING/U-box 9 62 - -
Pste3g01356 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 96 IPR013083 -
Pste3g01356 186 PANTHER UNCHARACTERIZED 3 183 IPR038896 GO:0061630
Pste3g01356 186 ProSiteProfiles Zinc finger RING-type profile. 11 54 IPR001841 -
Pste3g01356 186 ProSitePatterns Zinc finger RING-type signature. 26 35 IPR017907 -
Pste3g01356 186 Pfam Protein of unknown function (DUF1232) 131 165 IPR010652 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01356 36 186 C3H Transcription Factor Family AT1G72175 72.185 2.74e-67 201