Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01300 AGAATAAGAAATGCTGTAAATGAGAGGAAAAAAACAGTTAAAGGGGACAAAAAAAAATTAGCAAGCCTCTTCAGTTCAGGTCTCCATGCTGTAACAGACTACAGAAATAGTGAACTAACAATAAAAGTCAGGCTTCTTTCAGCTGTAAGGCACAGGAATCTTATTGGTCTGGCAAAGACTAAACTAAACATAGCAATAGGAGCAGCAAGACCTTATTTGCATGAAGGGGTGAAGCCAAGCATAATTCACCGTGACATCAAACCAAGTAACATCCTGTTAGGGGAAAGTTTTGAGGCTAAGGTTTCAAATTTTGGTCTAGTAAGATCAGGGCCTATTGGTGATGAGTCACATATTAGCAGCCAAATCAAAGGGACAGCAGGGTACCTTGACACTGCCTATTGTTCAAGCTTTCATTTGACCAAATTCAGTGACCTTTGGTATCATACATTTGCAACTTGTTTCTTCACCGAACCCCTCTTTTATCAAATACTAGCAAGCAGAAATTACAATATTAAGTATGGACTAACTTTGCTTGAGGACAAATATCCCATACTAAATGATAGGATTGGAATATCGATAAGACCAGCACATTGGGTTGCATGA 603 0.3864 RIRNAVNERKKTVKGDKKKLASLFSSGLHAVTDYRNSELTIKVRLLSAVRHRNLIGLAKTKLNIAIGAARPYLHEGVKPSIIHRDIKPSNILLGESFEAKVSNFGLVRSGPIGDESHISSQIKGTAGYLDTAYCSSFHLTKFSDLWYHTFATCFFTEPLFYQILASRNYNIKYGLTLLEDKYPILNDRIGISIRPAHWVA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01300 200 SUPERFAMILY Protein kinase-like (PK-like) 71 146 IPR011009 -
Pste3g01300 200 PANTHER OS01G0750732 PROTEIN 60 146 - -
Pste3g01300 200 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01300 200 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Pste3g01300 200 Gene3D Transferase(Phosphotransferase) domain 1 49 167 - -
Pste3g01300 200 Pfam Protein kinase domain 66 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01300 Pste-Chr3 8159825 8161383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01300 61 146 Receptor kinase-like Gene Family AT1G07560 53.409 1.83e-23 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pste3g01300 Pkinase 2.1e-09 CL0016