Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01262 CTGGGCAAAATCTTGCCCGTACTCGTTGATCAAGAAAAGTTAATGAATCAAACAAGCTTTCGGGAAAACCAAAAAGAAACCGTGTATCTATGTATACTACCTGCAATATCCCCCAAAGATGCTATGAAGTACTCATATTCTCTGGTGGCTCCGGAATACAGAAAAAATGAATGGAAAACCATGGCAATGACTGTGGTGTTGCTTCAGCTGAGTTTTTCCTTGGAGATTTTCTGTCTCTCTTATCATGTAGATAGAATTGTTCGGCTTCCCGGGCAGCCCAACATAGGCTTCCATCAGTTTTCAGGATATGTTTCAGTGGATGACATGAAACACAAGGCTCTGTTTTACTATTTTGTTGAATCAGAAACTAATCCAGCTTCAAAGCCTCTTGTTCTCTGGCTCAATGGAGGGCCTGGTTGTTCTTCTCTTGGAGTAGGTGCATTCTCTGAAAATGGACCTTTCAGGCCAAATGGAGAAGTTCTGATTAAAAATGAGTACAGTTGGAACAGAGAAACAAACATGTTGTATTTGGAAGCGCCAGTAGGAGTGGGGTTCTCTTACGTTAAAGGTGGCTCCTCCTATGAGACTGTGAATGATGAGACAACAGTACTTTTGATTTCTCAAGCCAGGGACAATCTTGTTTTCTTGCAACGCTGGTTCAAGAAGTTCCCTCAATACAGACACAGAGATTTGTTTCTAGCAGGTGAAAGTTATGCAGGACATTACATTCCACAACTTGCAAAGCTCATGATTGAAATAAACAAAAAAGAGAAGATGTTCAATCTGAAAGGCATAGCCCTGGGTAATCCAGTTCTAGAATATGCCACTGACTTCAATTCAAGGGCCGAGTTCTTCTGGTCTCACGGATTGATATCAGATTCAACATACAAATTGTTCACTACAGGTTGTAATTATTCCCGGTATGTCAGTGAATACTATAGAGACTCAATTTCGCCGCTTTGTTCAAAGGTTATGAAGCAAGTAAGCAGAGAAACCAGTAAGTTTGTTGACAAATATGATGTCACGCTTGATGTTTGCATTTCCTCAGTGCTTTCACAATCTAAAGCTATTTGTCCTCACGGCCAACAGACAAATGAGAGAATAGATGTATGTGTAGATGACAAAGTTACAAATTACTTAAACCGAAAAGATGTACAAGAGGCACTCCATGCCAAGCTTGTCGGAGTTCGAAAGTGGGATGTCTGCAGCAACATTTTGGATTATGGAATGCTCAACTTGGAGGTACCAACACTCCCTGTTGTTGGATCACTAATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGCACCTTAGTTCAAAAGCTGGCTAAACAAGTAGGACTAAATACAACAGTCCCTTATAGAGTATGGTTTGAAGGCCAGCAGGTGGGCGGGTGGACTCAAGTGTATGGCAATATCCTCTCATTTGCTACAGTTAGAGGTGCCTCCCATGAAGTCCCTTTCTCACAGCCTGAAAGATCACTAGTTTTGTTTAAGTCATTCTTGGAAGATAGGCCCCTACCAGAAATTTTCTGACACAACTTAATGTTTTTCTAATTTAGTTAGTAAGCCTGAAATTTGTACTATATATAATTATTAAAGGAATGTATTAAGTGTACAATTTCAAAAGAAAAGTTGGTAAAAAATATTAGAGGGGTTTGTTGAGATCCATGAGCGGCAATTAATTAAAAAT 1729 0.3997 LGKILPVLVDQEKLMNQTSFRENQKETVYLCILPAISPKDAMKYSYSLVAPEYRKNEWKTMAMTVVLLQLSFSLEIFCLSYHVDRIVRLPGQPNIGFHQFSGYVSVDDMKHKALFYYFVESETNPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNRETNMLYLEAPVGVGFSYVKGGSSYETVNDETTVLLISQARDNLVFLQRWFKKFPQYRHRDLFLAGESYAGHYIPQLAKLMIEINKKEKMFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKLFTTGCNYSRYVSEYYRDSISPLCSKVMKQVSRETSKFVDKYDVTLDVCISSVLSQSKAICPHGQQTNERIDVCVDDKVTNYLNRKDVQEALHAKLVGVRKWDVCSNILDYGMLNLEVPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLAKQVGLNTTVPYRVWFEGQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLEDRPLPEIF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01262 523 FunFam Carboxypeptidase 417 516 - -
Pste3g01262 523 ProSitePatterns Serine carboxypeptidases, histidine active site. 486 503 IPR033124 GO:0004185
Pste3g01262 523 ProSitePatterns Serine carboxypeptidases, serine active site. 233 240 IPR018202 GO:0004185
Pste3g01262 523 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 86 503 IPR001563 GO:0004185|GO:0006508
Pste3g01262 523 Gene3D alpha/beta hydrolase 81 348 IPR029058 -
Pste3g01262 523 Gene3D - 417 515 - -
Pste3g01262 523 PRINTS Carboxypeptidase C serine protease (S10) family signature 486 499 IPR001563 GO:0004185|GO:0006508
Pste3g01262 523 PRINTS Carboxypeptidase C serine protease (S10) family signature 177 187 IPR001563 GO:0004185|GO:0006508
Pste3g01262 523 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 176 IPR001563 GO:0004185|GO:0006508
Pste3g01262 523 PRINTS Carboxypeptidase C serine protease (S10) family signature 219 244 IPR001563 GO:0004185|GO:0006508
Pste3g01262 523 FunFam Carboxypeptidase 80 520 - -
Pste3g01262 523 Pfam Serine carboxypeptidase 93 515 IPR001563 GO:0004185|GO:0006508
Pste3g01262 523 SUPERFAMILY alpha/beta-Hydrolases 87 520 IPR029058 -
Pste3g01262 523 Gene3D - 371 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01262 Pste-Chr3 7986759 7990462 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01262 379 519 Calmodulin-binding Proteins AT2G22960 26.241 2.84e-14 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01262 3 7986759 7990462 Pste3g01262 3 7986759 7990462 ECH