Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01257 ATTTTCCACAAAATTCCGAATCACTCCCACATCACATTCTCAACACAACTCAAGTTTACACCAACTACCCTTTTTTCTCTTCCGTTTTCTTCTCAAATTGTTCCCATTTTTTCACTTTGATTCACCCCACCAAATGACGTATTTCCCTCTTCACTTGCCAACCCCGAAATCATAGGGTCTCTCTCTGTTCTTTCAGATCCTTTTCCTCTTTTTTTCTTGTTCCAGGTTTTGGTTTGAATGGGGATTCAGACAATGGTATCTCAAGGTAATGGGCAACAGTCTCATTTACAGCCTTCATCTTTGTCTAGGCAAGGTTCATGGTATAGTCTTACTCTTGATGAGGTTAATAGTCAATTAGGAGATATGGGGAAGCCATTAGGGAGCATGAACCTTGATGAACTTCTTCAAAATGTGTGGACTGCTGAAGCCAGCAAGTCTTCAGTGATAGGCATGGATAGTGAGAACATGTCATCCTCTTCCTCACTTCAACGGCAGGCCAGCCTGACCCTGGCTCGCGCGTTGAGTGGGAAGACAGTGGATGATGTTTGGAGGGAAATTCAGCAAGGTCAGAGGAAAAGGTATGGAGAGGATGTGAAAATTCAGGAGGGAGAAATGACTCTTGGTGAGACCACCTTGGAGGATTTCTTGGTGCAAGCAGGGCTTTTTGCTGAAGCTTCTATTAGTCCAGCTGTGGGTTTGGATACAATGGATTCCCTGGCCGTGCAAGGTTTCCAGCAGAAAGCAGGCCTGTCATCTTCCCCTTCAATTGGCAGTTTATCGGACACAAGACCGGGCCGGAAGAGGGATGCTCCTGACGCGTATGAGAAAACTTTAGAAAGGAGGCTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCCCGGTCCCGAGCCCGAAAACAGGCTTACCATAATGAATTGGTTAGCAAGGTTTCACGACTAGAAGAAGAAAATGTAAAGCTCAAGAAAGAGAAGGAATTTGATGAAAGGTTACCTCCAGATCCATCACCTGAACCTAAATATCAGCTTCGAAGACATAATTCAGCCTCTTTCTGACATGTAATTTGCAATTAAGTTTTCTTGTCATTCATGTTCTTGATTTGATGGGGACGTGTCCAGGAATTGCATCACTATATTGCTCATTGCTATTGCTACTGCTTTGCATTTGCACCAGTAAGAGGGTTTGCTCCATATCTACAATTAACTAACTATAGGGTACATATGCAGCAAAGGTTTGACGTTCATAAGCTTTAGCTTTGCTTGAAAAAGTATCAGGAAATATTTGAATCCAGTGGAAGCCTGGAAGTTGCCTTTTTGTATAATGATTATCTGTGTGTATTAAAGCAATTATTAGGCAGTTAAGTTATTGAAAGGTGACTACCAAAAAAGCTGAAACTAGGTAAGGTAGGTATTTATTGTTAGCATTTCTGAACTGCAATATTGTATTAGTCTAAACTATTATCTGTTGGAAAGTGTTAGGGGGAAAATGCAGTTATGAGAATTAGTGTGCTTGTAGAGAAAATGTTCTAGCAAAGATGAAATATCAAAAGAAAAGTTTGTTTATTATTATCTTTTCCAGTGCAGTTTGCCA 1588 0.4118 MGIQTMVSQGNGQQSHLQPSSLSRQGSWYSLTLDEVNSQLGDMGKPLGSMNLDELLQNVWTAEASKSSVIGMDSENMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQRKRYGEDVKIQEGEMTLGETTLEDFLVQAGLFAEASISPAVGLDTMDSLAVQGFQQKAGLSSSPSIGSLSDTRPGRKRDAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENVKLKKEKEFDERLPPDPSPEPKYQLRRHNSASF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01257 271 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 22 268 IPR043452 GO:0003700|GO:0045893
Pste3g01257 271 MobiDBLite consensus disorder prediction 239 261 - -
Pste3g01257 271 Pfam bZIP transcription factor 201 244 IPR004827 GO:0003700|GO:0006355
Pste3g01257 271 CDD bZIP_plant_BZIP46 201 246 - -
Pste3g01257 271 SMART brlzneu 197 269 IPR004827 GO:0003700|GO:0006355
Pste3g01257 271 MobiDBLite consensus disorder prediction 239 271 - -
Pste3g01257 271 MobiDBLite consensus disorder prediction 167 197 - -
Pste3g01257 271 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Pste3g01257 271 MobiDBLite consensus disorder prediction 1 21 - -
Pste3g01257 271 SUPERFAMILY Leucine zipper domain 201 247 IPR046347 GO:0003700|GO:0006355
Pste3g01257 271 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 244 IPR004827 GO:0003700|GO:0006355
Pste3g01257 271 MobiDBLite consensus disorder prediction 183 197 - -
Pste3g01257 271 Coils Coil 224 251 - -
Pste3g01257 271 MobiDBLite consensus disorder prediction 167 181 - -
Pste3g01257 271 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 199 251 - -
Pste3g01257 271 Gene3D - 199 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01257 Pste-Chr3 7955577 7960286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01257 21 271 bZIP Transcription Factor Family AT3G56850 46.853 3.40e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste3g01257 bZIP_1 2.2e-11 CL0018