Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01253 TTGGGACAATTATTTCAAAACACACAACACAACACAGCCTGAGACAGACAACAAACACCAACTGATAGAAACATCATCAACAACAACAACATGGTAAGAAAACTAGGTTGGATCAAATTCCATTAACCGAGGAAAAAAGAACCAACAAAAGGGAACCAAATAACTGGTTGGGTCGGGTTCGGGTTTTGGGATCCGTTTCTCTGGTTCAACCGTTGTTGTTGTGGTGTTCCTGAGGTGAGGGGTGAATGGCTGGGATTGATGATAATGTTGCCCTTACTGGTGAATGGGGTCTTCCTAGCCCAAACCCAAGGACCTTTTTTTCTAGAATGTTAGATGAAGATAATGTGACAAGATCAATCTCAGAACATTCTGGAAGTGGTAGAACTGGGGATCTCTTTTCAGGACCTAGTGGGACAGAGAAGGGGAACTTGAAAGATAGGGCACAAGATGGTGATTCTGGAACCCAATTGACCGATGTGAACTTTCATACTGAGCAGAAGTCGAGCTCTCGGGGTGGTCTTGTTGAAAGAATGGCTGCTAGGGCCGGGTTTAATGCGCCGAGGTTGAATACAGAAAGCATTAGATCTACTGACCTTTCACTGAATTCTGATATTCAGTCTCCTTACTTGACCATCCCGCCTGGTCTCAGTCCTACCACACTTTTAGATTCTCCTGTGTTCCTTGCAAATTCACTGGCACAGCCATCTCCAACAACTGGAAAGTTCCTGTTCATGTCAAATGGCAACATGCGAAACTTGGAATTATCATCTGATGCTCCAGAAAAATGTAAAGATAATGTCTTTGGTGACATCTATACATCATCCTTTGCTTTCAAGCCTATAACAGATTCAGGCTCCTCTTTGTATCATGTTGCTGGAAGAAAGATAAATCCAACTTCACTTCCTCAACAATCCCTTCCTGGTATTGAGGGTTCGGCTCGGTCAGAAAATTCTTTTCAATCTCAAAGTGTTGATGCTGTCAAAGTTCAAACTGAGAACAAAAGTGGCCTTCATCTTCAGGCAGACTTTGTTGAATCGCCTCCACAAAAAGATGATGGAATTAAAATGTTCTCAGGTGATCAAAGGGCTTTTGATGCTGCTGCTAGTGGCATTGAACATTCTACTCCAATGGAAGAGCAAGTAGATGAAGAAGGGGATCAACGGGGAAATGGAGACTCAATGACTGGTGGTGCACCATCTGAAGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTGAAGGGCAGTGAGTACCCTCGAAGTTACTACAAGTGTACACATCCAAACTGTCAGGTTAAGAAGAAAGTAGAAAGATCTCATGAGGGCCACATAACTGAGATCATCTACAAGGGAACACACAACCACCCTAAACCTCCTCCAAATCGCCGATCAGGTATAGTTTCTGTTAATCTTCATACTGACATGCAACTGGACAACCCTGAACATGTTGAACCCCACAATGGTGGAGATGGCGACTTGAGCTGGGCTAATGTACAAAAGGGAAATATAGCTGGAGCTGCTAATTGGAAGCACGACAACCTTGAAGCAACATCATCACCACCTGTTGGCGCTGATTACTGCAACCAGCCCACCAATTTGCAGACTCAAAATGGTACTCAGTTTGATTCAGGAGAGGCAGTGGATGCCTCATCTACTTTCTCTAATGAAGAAGATGAAGACGATCAAGGCACTCATGGTAGTGTATCATTAGGTTACGATGGAGAAGGAGATGAATCAGAGTCTAAGAGAAGGAAACTGGAATCATATGCAGAGTTGAGTGGAGCTACTAGAGCCATCCGTGAGCCTAGAGTTGTTGTACAGACTACCAGTGAAGTAGATATCCTTGATGATGGTTATCGGTGGAGGAAATACGGGCAAAAAGTTGTCAAAGGAAACCCAAACCCAAGGAGTTATTACAAGTGCACGAATGCAGGGTGCACGGTAAGGAAACATGTGGAGAGAGCATCACATGACCTTAAATCTGTGATCACTACTTATGAGGGAAAGCACAACCATGATGTTCCTGCTGCTCGTGCCAGCAGTCACATCAATGCTAACTCTTCCAATGCCGGCCCCGGCCAAGCTTCTGGGGTGCTTCAGACTCATGTTCATAGACCTGAACCATCTCAAGTACACAACGGCATTAGAAGGCTAGAGAGGCCTTCCCTTGGCTCATTCAACCTTCCTGGGAGGCAGCATCTGGGGCCTTCCCATGGCTTCTCCTTCAGCATGAACCAACCCATGCTATCAAATCTGGCAATGTCAGGTATAGGGCACGGCCATGCTCAAGCGAAGCTTCCGGTGATGCCTGTTCATCCATTCTTGGCACAGCAACAACGCCCTGCAAATGATTTGAGCTTCATGTTGCCAAAGGGAGAGCCAAATGTGGAGGGTATTCCTGAACGTGGTGGCCTTAACCTGCCAAATGGCTCATCAGTGTACCAAGAAATTATGAGTCGCATGCCTCTTGGACCTCATATGTAAAATTTTATTCCCTGATTCTTTAAAGGAAAACTAATGTTTACATCTTATAACATACATATATATACATATGTAATGCCCAGGCATACATAGGCGGACTTTTCATTATTAGACTGTCATTGTAATGTTTGACATTCTTCATCACATGTCAAAGGTATATGTAGTTTATTTTGCTGATTTATTGCATTCAAGATTACTACCAGGTCAATTTAAGAATTTGTGGCTGTTTTTTTTTATTGGTTGGTTAATAATACCGTAAGCATTTGACTCG 2754 0.4365 MAGIDDNVALTGEWGLPSPNPRTFFSRMLDEDNVTRSISEHSGSGRTGDLFSGPSGTEKGNLKDRAQDGDSGTQLTDVNFHTEQKSSSRGGLVERMAARAGFNAPRLNTESIRSTDLSLNSDIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMSNGNMRNLELSSDAPEKCKDNVFGDIYTSSFAFKPITDSGSSLYHVAGRKINPTSLPQQSLPGIEGSARSENSFQSQSVDAVKVQTENKSGLHLQADFVESPPQKDDGIKMFSGDQRAFDAAASGIEHSTPMEEQVDEEGDQRGNGDSMTGGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGTHNHPKPPPNRRSGIVSVNLHTDMQLDNPEHVEPHNGGDGDLSWANVQKGNIAGAANWKHDNLEATSSPPVGADYCNQPTNLQTQNGTQFDSGEAVDASSTFSNEEDEDDQGTHGSVSLGYDGEGDESESKRRKLESYAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHINANSSNAGPGQASGVLQTHVHRPEPSQVHNGIRRLERPSLGSFNLPGRQHLGPSHGFSFSMNQPMLSNLAMSGIGHGHAQAKLPVMPVHPFLAQQQRPANDLSFMLPKGEPNVEGIPERGGLNLPNGSSVYQEIMSRMPLGPHM 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01253 746 MobiDBLite consensus disorder prediction 217 240 - -
Pste3g01253 746 MobiDBLite consensus disorder prediction 1 20 - -
Pste3g01253 746 SUPERFAMILY WRKY DNA-binding domain 316 377 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g01253 746 MobiDBLite consensus disorder prediction 441 470 - -
Pste3g01253 746 FunFam WRKY transcription factor 309 378 - -
Pste3g01253 746 Gene3D WRKY domain 310 378 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g01253 746 ProSiteProfiles WRKY domain profile. 313 377 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g01253 746 Gene3D WRKY domain 521 587 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g01253 746 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 141 608 IPR044810 GO:0003700
Pste3g01253 746 SUPERFAMILY WRKY DNA-binding domain 526 594 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g01253 746 SMART WRKY_cls 318 376 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g01253 746 SMART WRKY_cls 534 593 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g01253 746 MobiDBLite consensus disorder prediction 432 505 - -
Pste3g01253 746 MobiDBLite consensus disorder prediction 67 89 - -
Pste3g01253 746 FunFam WRKY transcription factor 33 521 587 - -
Pste3g01253 746 MobiDBLite consensus disorder prediction 36 90 - -
Pste3g01253 746 ProSiteProfiles WRKY domain profile. 529 594 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g01253 746 Pfam WRKY DNA -binding domain 319 375 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g01253 746 Pfam WRKY DNA -binding domain 535 591 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g01253 746 MobiDBLite consensus disorder prediction 289 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01253 Pste-Chr3 7937057 7941718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01253 1 741 WRKY Transcription Factor Family AT5G56270 49.607 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste3g01253 WRKY 3.8e-24 CL0274