Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01249 AGAGAAGAAAGCTTACCTTACGAGGAAGATGTCATGGTCACCACCAAGAACAGTAGTGGGGTTCGTTTTTGTTGTGATTGCCTTATTATTCGCCATCGCAGTAACAGCAGAAGAAGAAACCTCGGAAAAGCTTCTATTGATGCGCTTCAAGCAGTTACACGTTTCCTCCGATCCAAACAGCTTCCTCTCCAACTGGCTCCCCCACGCCCCTTCCCCCTGCGCGTGGAACGGCGTCACCTGCTCCGCCGACTCCCGCCGCCCGGCGCCGCCCTCTCCGGCGCCCTCCACCTCCCACTCTCACCTCCCTCCCTCGCTCCGACGCCTCGTCCTACGTGGCAACTCCTTCTCCTCTTTCAACCTCACCGTTTCAACCACTTGCGCGCTCCAAACACTCGACCTCTCTTATAACAACTTCTCCGGAAAGTTTCCTTTCGCTAACCTAACTCCATGTAACCGCCTCACTCACCTAAACCTTTCAAATAATCTCATCACCGGGCCCGGGCCTGGGCCTGGGCCCGGCCTCGGGCTCTCACTGGCCCAACTTGACCTCTCCAGAAACATTGTTTCCAACGTGAGCCTTCTCGTGTCCGCTCTCGGAACCTCCACTCTCCTTCTGCTCAACTTCTCCGACAACAAACTCGCGGGTCAACTCAGCGAAACGCTCGTTTCGAAGAGCGCGAGCCTCTCCACTTTGGACCTCTCTTGTAACCTTCTCTCCGGAGATGTTCCGCCGCGGCTTGTAAACGGCGCCGTTCAGCTCCTTGATCTCTCGTCCAACAATTTCTCCGGCGGCTTCTCCGGTTTTGATTTCGGCGAGTGCAGGAATCTTAAACGATTGAGTTTCGCGCGCAATGCGATCTCCTCCGACGAGTTTCCTCGCGGGTTGAGTAACTGCAACAGTCTCGAGCTTCTAGATCTTTCTCACAATGAGTTCAAGATGAATATTCCCTGGGGAATTCTTCACAATATGAAGAGTTTGAAGTCTCTGTTTCTCGGACATAACAAATTTGACGGTGAAATAGCGAGCGAACTTGGGAACCTTTGTGAAACTCTTGTTGAACTTGATCTCTCCGAGAACAAGCTTTCTGGTTCATTGCCTTCGAGTTTCGCAGAGTGTTCTTCTCTGATGAATTTGAACCTCGCGAGAAACAATCTCTCTGGTGATTTTCTTGTTTCCGTGGTGAGCAAGCTTCAGAGTCTTGTGTATCTTGACGCAGCGTTTAACAACATAACGGGACCGGTTCCGTTGTCGCTTGTTAACTTGAAGCAGCTTAGGGTTCTTAACCTGAGTTCGAACCGGTTCAACGGCAATGTTCCGTCGTCGTTTTGTCCTTCGGGGTTGGAGAAGTTGATCCTCGCTGGCAATTACCTTTCGGGGACGGTGCCGTCACAGCTCGGTGAGTGTAAGAACTTGAAAACCGTTGATTTTAGCTTTAACAATTTGAACGGTTCGATACCGTGGGAGATTTGGGCTTTGCCTAAGCTAACTGATTTGATTATGTGGGCGAATAATCTCACGGGAGAAATCCACGAGGGGATTTGTGTGAAGGGAGGGAACTTGGAGACGTTGATTCTGAACAATAATATGATTTCTGGGTCCATTCCGAAGTCAATTGCGAATTGCACCAACATGATATGGGTGTCATTGGCGAGCAACCGGTTAACCGGAGAGATACCGGCTGGGATTGGGAATTTGAATGCATTGGCGATTCTTCAGCTGGGGAATAACTCACTGAGTGGGAGGATTCCACCGGAGATAGGCGGTTGTAGGAGGTTGATATGGTTGGATTTGAATAGCAATAACCTAACTGGGACTATCCCGTTGCAGCTTGCAGAGCAAGCGGGGTTGGTCGTCCCGGGGAGGGTTTCTGGGAAGCAATTTGCGTTTGTGAGGAATGAGGGTGGGACTAGTTGCAGGGGTGCTGGTGGGTTGGTTGAGTTTGAGGATATTAGGACTGAGAGGCTTGAAGGTTTTCCCATGGTGCATTCGTGCTCGTTGACGCGGATTTACTCCGGTTTGACTATGTATACTTTTGCCACCAATGGCAGTATGATCTATCTTGACCTTTCCTACAACTTGTTGTCCGGAAGTATTCCTGATAATTTGGGTGAGATGGCCTATTTGCTGGTGTTGAATTTGGGGCACAATAGGTTGAGTGGGAACATTCCAGATAGTTTTGGTGGTTTGAAAGCAATAGGGGTGCTTGATCTGTCTCATAACAGTCTTAATGGGTATATCCCTGGGTCATTGGAGAGTCTGTCTTTTCTCAGTGACCTTGATGTGTCTAATAACAACCTTACTGGGTCAATTCCTTCTGGAGGTCAGTTAACCACTTTTCCAGCTTCCAGATACGAGAACAATTCTGGCCTTTGTGGCTTGCCACTGCCGTCATGTGGTGGTTCAAAGAATCGCTCAGCTGCTGTTGGGGGTTGTAAAAAGAAGCAGCCTGTTGCAGCTGGGGTTGTCATTGCTTTGCTTTGCTTTCTCTTGTTTGCACTTGGGTTTGTGTTGGCTTTGTACCAGGTGAGGAAGACGCAGAGGAAGGAGGAGATGAGAGAAAAGTATATAGAGAGTCTTCCAACTTCGGGGAGCAGTAGTTGGAAGCTTTCCAGTTTTCCTGAGCCTCTGAGTATCAACGTTGCCACCTTTGAGAAGCCTCTGCGTAAACTCACTTTTGCACATCTTCTTGAAGCTACTAATGGCTTCAGTTCTGAGAGTTTGATAGGTTCTGGTGGGTTTGGTGAAGTGTACAAAGCCAAGCTGAAAGATGGTTGTATTGTTGCCATTAAGAAGCTCATTCATGTGACGGGTCAGGGAGATAGGGAGTTCATGGCTGAGATGGAAACTATTGGGAAGATTAAGCATAGGAACTTGGTTCAACTGCTTGGTTACTGTAAAGTTGGAGAGGAGAGGCTTCTTGTGTATGAGTTCATGAAATGGGGAAGTCTTGAGGCTGTTCTACATGAGAGGGCAAAAGGAGGTGGTTCAAAGCTTGATTGGTCTGCAAGGAAGAAGATTGCCATAGGGTCAGCACGAGGTCTTGCATTTCTTCACCATAGTTGCATTCCTCACATTATACACAGGGACATGAAGTCTAGCAATATTCTTCTTGATGAAAACTTTGAGGCCAGAGTTTCTGATTTTGGCATGGCAAGATTGGTTAATGCCCTTGACACCCATCTCACAGTCAGCACACTTGCCGGAACACCCGGTTATGTACCTCCTGAGTACTACCAGAGTTTTAGATGTACAGCAAAAGGGGATGTCTATAGCTATGGTGTCATATTGCTAGAGCTTCTATCAGGGAAGAGACCGATTGATTCTTCTGAGTTTGGTGATGACAGCAATCTTGTTGGATGGTCTAAGAAGCTTTACAAAGAGAAAAGAATTAATGAAATACTTGATCCTGATTTAATTGTGCAAACATCTAGTGAAAGTGAACTATTACAATATTTGAGAATTGCTTTTGAATGTCTGGATGAGAGACCATACCGTCGCCCGACCATGATACAAGTGATGGCCATGTTTAAAGAGCTTCTTAAAGAGCTTCAGGTTGACACGGATAATGATATGCTTGATAGCTTCTCTCTGAGAGAAAATGTTATTGATGAAACA 3616 0.4754 MSWSPPRTVVGFVFVVIALLFAIAVTAEEETSEKLLLMRFKQLHVSSDPNSFLSNWLPHAPSPCAWNGVTCSADSRRPAPPSPAPSTSHSHLPPSLRRLVLRGNSFSSFNLTVSTTCALQTLDLSYNNFSGKFPFANLTPCNRLTHLNLSNNLITGPGPGPGPGLGLSLAQLDLSRNIVSNVSLLVSALGTSTLLLLNFSDNKLAGQLSETLVSKSASLSTLDLSCNLLSGDVPPRLVNGAVQLLDLSSNNFSGGFSGFDFGECRNLKRLSFARNAISSDEFPRGLSNCNSLELLDLSHNEFKMNIPWGILHNMKSLKSLFLGHNKFDGEIASELGNLCETLVELDLSENKLSGSLPSSFAECSSLMNLNLARNNLSGDFLVSVVSKLQSLVYLDAAFNNITGPVPLSLVNLKQLRVLNLSSNRFNGNVPSSFCPSGLEKLILAGNYLSGTVPSQLGECKNLKTVDFSFNNLNGSIPWEIWALPKLTDLIMWANNLTGEIHEGICVKGGNLETLILNNNMISGSIPKSIANCTNMIWVSLASNRLTGEIPAGIGNLNALAILQLGNNSLSGRIPPEIGGCRRLIWLDLNSNNLTGTIPLQLAEQAGLVVPGRVSGKQFAFVRNEGGTSCRGAGGLVEFEDIRTERLEGFPMVHSCSLTRIYSGLTMYTFATNGSMIYLDLSYNLLSGSIPDNLGEMAYLLVLNLGHNRLSGNIPDSFGGLKAIGVLDLSHNSLNGYIPGSLESLSFLSDLDVSNNNLTGSIPSGGQLTTFPASRYENNSGLCGLPLPSCGGSKNRSAAVGGCKKKQPVAAGVVIALLCFLLFALGFVLALYQVRKTQRKEEMREKYIESLPTSGSSSWKLSSFPEPLSINVATFEKPLRKLTFAHLLEATNGFSSESLIGSGGFGEVYKAKLKDGCIVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVQLLGYCKVGEERLLVYEFMKWGSLEAVLHERAKGGGSKLDWSARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLTVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKRPIDSSEFGDDSNLVGWSKKLYKEKRINEILDPDLIVQTSSESELLQYLRIAFECLDERPYRRPTMIQVMAMFKELLKELQVDTDNDMLDSFSLRENVIDET 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01249 1196 Gene3D - 613 670 - -
Pste3g01249 1196 Pfam Protein kinase domain 894 1165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01249 1196 ProSitePatterns Protein kinases ATP-binding region signature. 899 922 IPR017441 GO:0005524
Pste3g01249 1196 FunFam Brassinosteroid LRR receptor kinase 969 1172 - -
Pste3g01249 1196 FunFam serine/threonine-protein kinase BRI1-like 2 854 968 - -
Pste3g01249 1196 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1016 1028 IPR008271 GO:0004672|GO:0006468
Pste3g01249 1196 PANTHER UNNAMED PRODUCT 312 1100 - -
Pste3g01249 1196 SMART LRR_typ_2 314 338 IPR003591 -
Pste3g01249 1196 SMART LRR_typ_2 720 743 IPR003591 -
Pste3g01249 1196 SMART LRR_typ_2 412 435 IPR003591 -
Pste3g01249 1196 SMART LRR_typ_2 744 767 IPR003591 -
Pste3g01249 1196 SMART LRR_typ_2 483 507 IPR003591 -
Pste3g01249 1196 SMART LRR_typ_2 556 580 IPR003591 -
Pste3g01249 1196 SMART LRR_typ_2 696 719 IPR003591 -
Pste3g01249 1196 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 668 789 - -
Pste3g01249 1196 Gene3D Phosphorylase Kinase; domain 1 856 968 - -
Pste3g01249 1196 Gene3D Ribonuclease Inhibitor 25 77 IPR032675 -
Pste3g01249 1196 SUPERFAMILY RNI-like 94 402 - -
Pste3g01249 1196 SMART serkin_6 893 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01249 1196 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Pste3g01249 1196 Gene3D Transferase(Phosphotransferase) domain 1 969 1191 - -
Pste3g01249 1196 SUPERFAMILY L domain-like 663 786 - -
Pste3g01249 1196 FunFam Serine/threonine-protein kinase BRI1-like 1 613 670 - -
Pste3g01249 1196 ProSiteProfiles Protein kinase domain profile. 893 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01249 1196 Gene3D Ribonuclease Inhibitor 79 160 IPR032675 -
Pste3g01249 1196 SUPERFAMILY L domain-like 339 601 - -
Pste3g01249 1196 SUPERFAMILY Protein kinase-like (PK-like) 874 1167 IPR011009 -
Pste3g01249 1196 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 437 609 - -
Pste3g01249 1196 Pfam Brassinosteroid receptor island domain 606 669 IPR045381 -
Pste3g01249 1196 Gene3D Ribonuclease Inhibitor 168 790 IPR032675 -
Pste3g01249 1196 Pfam Leucine rich repeat 701 757 IPR001611 GO:0005515
Pste3g01249 1196 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 168 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01249 Pste-Chr3 7898055 7901689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01249 29 1195 Receptor kinase-like Gene Family AT1G55610 62.395 0.0 1416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pste3g01249 Pkinase 1.8e-46 CL0016