Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01235 TGATATCTGTGTATTGTTCTCTGTTGCAAGAGATTGGCTTGGATCTCTGGTGGTGCAACACTTGGAATTCATAACATGGCTGAGCATCGAATGATAAGTTTCATTGCTTCTTCCTCTAATACTGTTTCTACTATGTGTTCGAAAACATATGATGTTTTTCTAAGCTTTCGAGGTGAAGACACTCGCAGAAACTTCACAAGTCATCTTTATGAAACTTTGACACAAAATAAAGTGGAAACTTATATTGACAACCTACTTGAAAAGGGAGATGAAATTTCAGCATCAATCCTTAAAGCCATTGAAAATTCTTATGTATCTATTATCATCTTCTCAGAGAACTACGCTTCCTCAAAGTGGTGTTTAGCTGAACTCAGCAAAATTCTAGAATGTAAGAAAGACTATGGACAAATTGTGATACCGGTATTTTACAACATAGATCCCTCTCATGTGCGGAAGCAAACTGGGAGCTATCAGCAAGCCTTTTCAAAGCATGAGGGAGAACTCATGTGCAACAAATGGAAAGCTACACTCACTGAAGTGGCTAATCTAGCTGGTTGGGACTCTCGAAATAGGGTTGAATCTGAATTCCTTAAGGACATTGTTAAAGATGTTTTGGGAAAATTGACTCCCAAATACCCCAACCAACTTAAAGGACTAGTTGGAATTGAAGAAAGTTATGAGCATATTGCATCATTACTGAAAATTGAGTCAAGTGACATTAGAACTCTTGGAATATGGGGTATGGGTGGCATAGGTAAGACAACTCTTGCTACTACTTTATTTGACAAAATTTCTTATGAGTTTGAAGGACGTTGTTTCCTCACAAGTGGAACTGATTTTGTTGAAGGCATAATTTTAGATTTGGAGAAATTAGTTGGTGATCTATATTTGAACTCTGATTGCCTTGCAAAGATGACTAACATGAGATTTCTTAAAATCCATGGATGGAAGCCAGGTTGTAGATTTAATGTATATCTTCCTAATGGTCTTGAATCATTGTCTTGTAAATTAAGGTACCTTCAATGGGAAGGATTCTGTCTCAAGTCTTTGCCATCTAATTTTTGTGCTGAAAAACTTGTAGAGCTTCATATGCGAGATAGCAAGCTTAAAAAGCTTTGGGATGGGGTTCAGGATCTTGTGAATTTAAAGACAATTGACCTTGATGACTCTCAAAACCTAATTGAGATCCCAGACTTATCTATGGCAAAAAACCTTGATAGATTGTCTCTTTTTGGTTGTGAAAGCTTGTGTCAGCTCCATCCATCCATCTTATCTCTCCCTAAGCTTACATATTTGATTCTAAGTGGCTGCAATGAAATTGAAAGCCTTAATGTTCATTCAAAGTCTCTCAATGTATTGAGACTTAGAGGTTGTTTATCTCTCAAGGAATTATCAGTAACATCAGAGGAAATGACACATTTGGATCTATCTCAGACCCCTATACACACATTGCTTTCATCAATGTTATCTCTTCCCAAACTTAAATACTTGTATTTAAGTGGTTGTAGAGAGATTAAAAGCCTTAATGAATTCTCAGTTACATCAGAGAAATTAACACTGTTGGAGTTGCCTAACACTCCTATATGTGCATTGCCATCATCAATTGGTCACTTATTGTCTTTAGAAGAGTTAGACTTGAGTGGAACTAATATTGAGTGCTTGCCTCCAATTATTAAAATCCTTTCAATGCTGAGAGTGCTTTGGTTAAATGATTGCAAAAATTTGGTGTCTCTACCAGAGCTTCCTCCATCCTTAAGAGATCTCTATTTAAATGATTGTTGGAAACTGATGTCTATGCCAAAGTTTCCACCATCAGTGAAAGAGGTGAGTGCTTTTAACTGCATTTCTCTGGACACAGACATCACACAAGAGCTAGTGTTACAACACATGTTACAAAATCATATACCTTACATACATCAACAATGTCATTACAATCCTACGTACTCTAATGGTGAGTATTTCATCTTCCCAATAGACCATGTCAACGACAAGTGTGGATTCCATACAATAAAGAGTTCAATAACTATTCCATTTCTTCCAAAATCTCACTTGCAAGGCTACATTTCTTTCATCATTATTTCTAAGGGACCATTGTCAGATCACCAACTATCTTGTTCTATTTATCGAGATGACATGTTCGTAGGTAATGACTCTTGGAGGTGTATAGGCTCTGAAAATTTAATTTCAGATCATGTGTTATTTTGGTATCATAATATCAACAAATTTGGTGGAACAAGTGAAGCTTATGATCCTTTTTGTAACTTAACATTTATATTTGAATTTGGTGGAGATAAAGACACCATAAAAAGGTGTGGGGTGTTTCCAGTATATTTAGCAGAATCTGTGTTTAAGTTGGAGAGTAGTAGCAGTGGCAGCAAGGAAATTTTATATAATGTGCCACAACCAGCAACAAACGGAGTTGGAGTTGCAGAGTGTAACAATGCAAATGAAGAAAACACAGAACAACTTTTCACAAGCAAGAGGAGGAGAACTGAACGTGACAATCTTCCTGTGATTACTTCA 2523 0.3646 MAEHRMISFIASSSNTVSTMCSKTYDVFLSFRGEDTRRNFTSHLYETLTQNKVETYIDNLLEKGDEISASILKAIENSYVSIIIFSENYASSKWCLAELSKILECKKDYGQIVIPVFYNIDPSHVRKQTGSYQQAFSKHEGELMCNKWKATLTEVANLAGWDSRNRVESEFLKDIVKDVLGKLTPKYPNQLKGLVGIEESYEHIASLLKIESSDIRTLGIWGMGGIGKTTLATTLFDKISYEFEGRCFLTSGTDFVEGIILDLEKLVGDLYLNSDCLAKMTNMRFLKIHGWKPGCRFNVYLPNGLESLSCKLRYLQWEGFCLKSLPSNFCAEKLVELHMRDSKLKKLWDGVQDLVNLKTIDLDDSQNLIEIPDLSMAKNLDRLSLFGCESLCQLHPSILSLPKLTYLILSGCNEIESLNVHSKSLNVLRLRGCLSLKELSVTSEEMTHLDLSQTPIHTLLSSMLSLPKLKYLYLSGCREIKSLNEFSVTSEKLTLLELPNTPICALPSSIGHLLSLEELDLSGTNIECLPPIIKILSMLRVLWLNDCKNLVSLPELPPSLRDLYLNDCWKLMSMPKFPPSVKEVSAFNCISLDTDITQELVLQHMLQNHIPYIHQQCHYNPTYSNGEYFIFPIDHVNDKCGFHTIKSSITIPFLPKSHLQGYISFIIISKGPLSDHQLSCSIYRDDMFVGNDSWRCIGSENLISDHVLFWYHNINKFGGTSEAYDPFCNLTFIFEFGGDKDTIKRCGVFPVYLAESVFKLESSSSGSKEILYNVPQPATNGVGVAECNNANEENTEQLFTSKRRRTERDNLPVITS 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01235 816 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 422 580 IPR044974 GO:0006952
Pste3g01235 816 PRINTS Disease resistance protein signature 217 232 - -
Pste3g01235 816 PRINTS Disease resistance protein signature 464 480 - -
Pste3g01235 816 Pfam Leucine Rich Repeat 333 352 IPR011713 -
Pste3g01235 816 Gene3D - 21 184 IPR035897 -
Pste3g01235 816 Pfam NB-ARC domain 202 262 IPR002182 GO:0043531
Pste3g01235 816 Pfam TIR domain 25 195 IPR000157 GO:0007165
Pste3g01235 816 ProSiteProfiles Leucine-rich repeat profile. 515 536 IPR001611 GO:0005515
Pste3g01235 816 Gene3D - 185 295 IPR027417 -
Pste3g01235 816 ProSiteProfiles TIR domain profile. 23 183 IPR000157 GO:0007165
Pste3g01235 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 267 IPR027417 -
Pste3g01235 816 SMART till_3 24 158 IPR000157 GO:0007165
Pste3g01235 816 FunFam Disease resistance protein (TIR-NBS-LRR class) 21 185 - -
Pste3g01235 816 Gene3D Ribonuclease Inhibitor 444 610 IPR032675 -
Pste3g01235 816 SUPERFAMILY L domain-like 271 596 - -
Pste3g01235 816 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 161 IPR035897 -
Pste3g01235 816 Gene3D Ribonuclease Inhibitor 306 443 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01235 Pste-Chr3 7834858 7842453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01235 251 548 WRKY Transcription Factor Family AT4G12020 37.821 3.38e-33 136