Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01234 AGAGGGACATTGCCACAGCCTCAAACTCCTCACCAGTTCTTCAACTACAAACAAACCTTAAACTCCTCGCCCATTCTTCCCCCAGTGGCCACCACCTCCGCCACCGTTTACGGCGACTCCATGCGAAAACCGGCCGACGCCGCCGACCGTCGCTGGCATAACAGTGCAACTTCCGCTGCAGGCAATAATGCCGTTAAGGTTCGGGAGAAGCATAAGACTCCTCGCGCCGCCGAACTTTCCGGCGTCATTCCGTCACTGGAGCGCCGGAGACCTCGACTTGACTCATTCACGTCGAACCACCAGGGTTGGCCACCGTGGCTGATGGCCGTCGCCGGCGACGCAATCGGAGATTGGACTCCCCGTCGTGCCAACACGTTCGCGAAGCTTGCTAAGATTGGGCAAGGGACTTATAGCAATGTGTATAAAGCAAGAGACCTTGTTACCGGGAAGATAGTGGCTTTGAAGAAAGTTAGATTTGATAATTTGGAGGCAGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTGTTTTGAGGAAGCTTGATCACCCCAACGTTATCAAGCTTGAGGGGTTGGTTACTTCAAGAATATCATCTAGTCTTTACTTGGTATTTGAGTACATGGAGCACGACCTTGCTGGCCTTGCTGCTGGTGTAGGTGTCAAATTCTCTGAGCCACAGGTCAAGTGCTATATGAAGCAATTGCTATCTGGCCTTGAGCATTGCCACAGCAGAGGTGTTTTGCACCGGGATATTAAGGGTTCCAATCTGCTTATTGACGATGAAGGAATACTTAAAATTGCAGATTTTGGATTGGCAACTTTCTATGATCCTAAGCAAAAGCATCCCATGACTAGTAGAGTTGTGACCCTTTGGTATCGTCCCCCTGAGCTTCTTCTGGGAGCTACATCCTATGGTGTTGGTGTTGACCTTTGGAGTGCTGGCTGCATCTTGGCAGAGCTACTTGCTGGAAAGCCAATCATGCCTGGCCGGACAGAGGTTGAGCAGCTGCACAAAATATTTAAGTTATGTGGCTCTCCATCTGAGGAATATTGGAAGAAATATAGATTGCCAAATGCTACACTCTTTAAGCCGCAGCAACCGTATAAAAGATGCGTCCTAGAAATGTTCAGGGATTTTCCATCTGCTTCATTACCTCTAATTGAAAGTCTTCTTGCAATAGATCCTGATGATCGTGGCACTACCTCAGCTGCTCTAAATAGTGAATTCTTTACCACTGAGCCCTATGCCTGTGAACCATCTAGTTTACCAAAGTATCCTCCCACCAAAGAATTGGATATAAAACTGAGAGATGAAGAAGCCAGAAGGCAGAAAGCGCTAAGTGGAAAAACTAATGCAGTTGATGGTGCCAGAAGGGTAAGAGTACGTGAGCGTGGTTTGGCCATTCCGGCCCCAGAAGCTAATGCAGAGATCCAAAATAACTTAGATAGGTGGAGAGTTGTGACCCATGCAAATGCAAAAAGTAAGAGTGAGAAATTTCCACCTCCTCATCAGGATGGAGCTGTTGGATATCCACTGGATGCATCAAATAAAGGAGCTGTTTCATTTGGAGCCACTGAAACTTCCTCTGCCTCTACCATATTTGATTCAAAATCTTCTGGATCTGTCATAAGTAATGATGCTGCCAGAGACAAAAGGAGGAAGAAAACTAATAAAGCAGATTCCCAGATGGCAGCATCTTGGAAATTTATGCGTTCATTCAAGCTATCAACAATTGGCCATTCATTTGATTTGTTATTTAGAAGCAAATAATCTGTTCCTTTGGATTTTGGCATCCTAGAATGAGGAAAAGGAATGACTAATGCCTTGATAAATCATTTTTGCCCCTGCATTGTGGATTTTATATTTTTCTCGTGTTTATCCCATTGTTATGCATTTCATTTGACATCTAGTCTTTGTTGTATAATGTACAACAGTAGATCATCATTAGATCTGTATATTAATGTTTTTTTTTGCCACTCCAAGGGACCTTGGGAGAAGAGAGAGTTAGGAAAGGAAGGGACAAGACGGTGATAAATGTAATGAGAAAGGAAGTATATGGTGGGTGTGAATTATCAGGGTTGATTGTGTATATATTTAAAGGACCAGATCGCTACTGTACAGTTTTTGTGGGAGCAGATAGTCTTTAGTTCCTGACCTTGAAAATGTTCAAGTTTGCTAGAAAATGAA 2187 0.4449 RGTLPQPQTPHQFFNYKQTLNSSPILPPVATTSATVYGDSMRKPADAADRRWHNSATSAAGNNAVKVREKHKTPRAAELSGVIPSLERRRPRLDSFTSNHQGWPPWLMAVAGDAIGDWTPRRANTFAKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLEAESVKFMAREILVLRKLDHPNVIKLEGLVTSRISSSLYLVFEYMEHDLAGLAAGVGVKFSEPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDDEGILKIADFGLATFYDPKQKHPMTSRVVTLWYRPPELLLGATSYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRCVLEMFRDFPSASLPLIESLLAIDPDDRGTTSAALNSEFFTTEPYACEPSSLPKYPPTKELDIKLRDEEARRQKALSGKTNAVDGARRVRVRERGLAIPAPEANAEIQNNLDRWRVVTHANAKSKSEKFPPPHQDGAVGYPLDASNKGAVSFGATETSSASTIFDSKSSGSVISNDAARDKRRKKTNKADSQMAASWKFMRSFKLSTIGHSFDLLFRSK 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01234 589 PANTHER CELL DIVISION PROTEIN KINASE 124 414 - -
Pste3g01234 589 FunFam probable serine/threonine-protein kinase At1g54610 209 450 - -
Pste3g01234 589 SUPERFAMILY Protein kinase-like (PK-like) 120 415 IPR011009 -
Pste3g01234 589 SMART serkin_6 126 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01234 589 ProSiteProfiles Protein kinase domain profile. 126 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01234 589 Pfam Protein kinase domain 127 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g01234 589 CDD STKc_CDK9_like 126 410 - -
Pste3g01234 589 Gene3D Transferase(Phosphotransferase) domain 1 209 450 - -
Pste3g01234 589 FunFam probable serine/threonine-protein kinase At1g54610 113 208 - -
Pste3g01234 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Pste3g01234 589 MobiDBLite consensus disorder prediction 63 83 - -
Pste3g01234 589 Gene3D Phosphorylase Kinase; domain 1 113 208 - -
Pste3g01234 589 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Pste3g01234 589 MobiDBLite consensus disorder prediction 541 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01234 Pste-Chr3 7829490 7834030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01234 118 444 Core Cell Cycle Gene Families AT5G10270 51.312 3.20e-116 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste3g01234 Pkinase 3e-68 CL0016