Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01232 TTATAATTATCATTGCATGTGCAACACTTGGAATTCATAATATGGCTGAGCATCGAATGATAAGTTTCATTGCTTCTTCCTCTAATACTGTTTCTACTATGTGTTCCAAAACATATGATGTTTTTCTAAGCTTTCGAGGTGAAGACACTCGTAGAAACTTCACAAGTCATCTTTATAAAACTTTGACAAAAAATAAAGTGAAAACTTATATTGACAACCTACTTGAAAAGGGAGATGAAATTTCAGCATCAATCCTCAAAGCCATTGAAAATTCTTATTCTCAGAGAACTAGGCTTCCTCTCAAATGTTTGGCTGAACTCAGCAAGATTCTAGAATGTAACAAAGACTACCGACAAATTGTGATACCTATGATTGAATCTGAATTCCTCAAGGACATTGTTAAAGATGTTTTGGGAAAATTGACTCCCAAATACCGAAACCAACTTAAAGGAGTATCAAGTGACATTATAACTGTTGGAATATGGGGCATGGGTGGCATAGATAAGACAACTCTTGCTACTACTTTATATGACAAAATTTCTTATGAGTTTGAAGGACGTTGTTTCCTCACTGGTGTAAGGGAAAAATCATACAACCTGGAAGCTTTAGGTGATGAACTTTTATCAAAGTTGTTAGGCAATAAAAACCATGGGTTTAATAATTTTGACATGAGTATGCTTCGATGTAAACATGTTTTCATTGTCTTGGATGATAGATTAGAAAAGCTAATTGTAGAATGTGATTTCCCAGGGCCAGGAAGTAAAATCATTGTTACAACTAGAAATAAGCAAGTACTTAGCCTAGCTGATGAAATATATCAAGTTGAGGAATTGAGCTTATCACTTCCTTCAACTTTTCTAAAAGCTTGCAAAGGCATTCCTTTGGCTCTAAAAGTTTTGGGTGCAACTCTTCACAAAAAAAGTAAAGACATTGTCTTAGACATTGCATGCTCCTTCAGGGGATGGGCAAAAGATAGGGTAACAAGTATATTAGAAGCTTGTGATTTCTTTGCAACATCTGGGATAGAAGTTCTTTCAGATAAGGTTCTCATAACCGTTTCATATTGCAATCACATAAAAATGCATGACTTGAATACAGGAAATGGGGTTGTAGATTTCTTGCTAATGGTCTTGAATCATTGTCTTGTACCTTCAATGGGAAGGATTAGTGGTCTTAAATCATTGTCTTGTAAAGTGAGTTACCTTCAATGGGAAGGATTCTGTCTCAAGTCTTTGCCATCTAATTTTTGTGCTGAAAAACTTGTAGAGCTTCATATGCCAGATAGCAAGCTTAAAAAGCTTTGGGAT 1307 0.352 MAEHRMISFIASSSNTVSTMCSKTYDVFLSFRGEDTRRNFTSHLYKTLTKNKVKTYIDNLLEKGDEISASILKAIENSYSQRTRLPLKCLAELSKILECNKDYRQIVIPMIESEFLKDIVKDVLGKLTPKYRNQLKGVSSDIITVGIWGMGGIDKTTLATTLYDKISYEFEGRCFLTGVREKSYNLEALGDELLSKLLGNKNHGFNNFDMSMLRCKHVFIVLDDRLEKLIVECDFPGPGSKIIVTTRNKQVLSLADEIYQVEELSLSLPSTFLKACKGIPLALKVLGATLHKKSKDIVLDIACSFRGWAKDRVTSILEACDFFATSGIEVLSDKVLITVSYCNHIKMHDLNTGNGVVDFLLMVLNHCLVPSMGRISGLKSLSCKVSYLQWEGFCLKSLPSNFCAEKLVELHMPDSKLKKLWD 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01232 422 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 420 IPR044974 GO:0006952
Pste3g01232 422 Pfam TIR domain 25 148 IPR000157 GO:0007165
Pste3g01232 422 SMART till_3 24 153 IPR000157 GO:0007165
Pste3g01232 422 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 123 IPR035897 -
Pste3g01232 422 PRINTS Disease resistance protein signature 144 159 - -
Pste3g01232 422 PRINTS Disease resistance protein signature 276 290 - -
Pste3g01232 422 ProSiteProfiles TIR domain profile. 23 170 IPR000157 GO:0007165
Pste3g01232 422 Pfam Leucine Rich Repeat 406 422 IPR011713 -
Pste3g01232 422 Gene3D - 111 261 IPR027417 -
Pste3g01232 422 Gene3D - 19 110 IPR035897 -
Pste3g01232 422 Pfam NB-ARC domain 137 260 IPR002182 GO:0043531
Pste3g01232 422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 315 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01232 Pste-Chr3 7823669 7827416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01232 141 350 WRKY Transcription Factor Family AT5G45050 32.394 1.75e-26 110